Gene : Potri.011G101200 P. trichocarpa v3.0
Defline:  (1 of 4) K05356 - all-trans-nonaprenyl-diphosphate synthase (SPS, sds) Genomic Order:  1012
Name:  ? Potri.011G101200 Secondary Identifier:  ? PAC:27001617
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-6520 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.011G101200 0.5kb upstream 0.5kb upstream 3904 true Chr11: 12357437-12361340 Populus trichocarpa
Potri.011G101200 0.5kb upstream 0.5kb upstream 500 false Chr11: 12360841-12361340 Populus trichocarpa
Potri.011G101200 0.5kb downstream 0.5kb downstream 3904 true Chr11: 12356937-12360840 Populus trichocarpa
Potri.011G101200 0.5kb downstream 0.5kb downstream 500 false Chr11: 12356937-12357436 Populus trichocarpa
Potri.011G101200 1.0kb upstream 1.0kb upstream 4404 true Chr11: 12357437-12361840 Populus trichocarpa
Potri.011G101200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 12360841-12361840 Populus trichocarpa
Potri.011G101200 1.0kb downstream 1.0kb downstream 4404 true Chr11: 12356437-12360840 Populus trichocarpa
Potri.011G101200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 12356437-12357436 Populus trichocarpa
Potri.011G101200 2.0kb upstream 2.0kb upstream 5404 true Chr11: 12357437-12362840 Populus trichocarpa
Potri.011G101200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 12360841-12362840 Populus trichocarpa
Potri.011G101200 2.0kb downstream 2.0kb downstream 5404 true Chr11: 12355437-12360840 Populus trichocarpa
Potri.011G101200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 12355437-12357436 Populus trichocarpa
Potri.011G101200 5.0kb upstream 5.0kb upstream 8404 true Chr11: 12357437-12365840 Populus trichocarpa
Potri.011G101200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 12360841-12365840 Populus trichocarpa
Potri.011G101200 5.0kb downstream 5.0kb downstream 8404 true Chr11: 12352437-12360840 Populus trichocarpa
Potri.011G101200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 12352437-12357436 Populus trichocarpa
Potri.011G101200 10.0kb upstream 10.0kb upstream 13404 true Chr11: 12357437-12370840 Populus trichocarpa
Potri.011G101200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 12360841-12370840 Populus trichocarpa
Potri.011G101200 10.0kb downstream 10.0kb downstream 13404 true Chr11: 12347437-12360840 Populus trichocarpa
Potri.011G101200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 12347437-12357436 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.027     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain