Gene : Potri.011G094100 P. trichocarpa v3.0
Defline:  (1 of 3) K10592 - E3 ubiquitin-protein ligase HUWE1 (HUWE1, MULE, ARF-BP1) Genomic Order:  941
Name:  ? Potri.011G094100 Secondary Identifier:  ? PAC:27002387
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-7511 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.011G094100 0.5kb upstream 0.5kb upstream 15817 true Chr11: 11444006-11459822 Populus trichocarpa
Potri.011G094100 0.5kb upstream 0.5kb upstream 500 false Chr11: 11444006-11444505 Populus trichocarpa
Potri.011G094100 0.5kb downstream 0.5kb downstream 15817 true Chr11: 11444506-11460322 Populus trichocarpa
Potri.011G094100 0.5kb downstream 0.5kb downstream 500 false Chr11: 11459823-11460322 Populus trichocarpa
Potri.011G094100 1.0kb upstream 1.0kb upstream 16317 true Chr11: 11443506-11459822 Populus trichocarpa
Potri.011G094100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 11443506-11444505 Populus trichocarpa
Potri.011G094100 1.0kb downstream 1.0kb downstream 16317 true Chr11: 11444506-11460822 Populus trichocarpa
Potri.011G094100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 11459823-11460822 Populus trichocarpa
Potri.011G094100 2.0kb upstream 2.0kb upstream 17317 true Chr11: 11442506-11459822 Populus trichocarpa
Potri.011G094100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 11442506-11444505 Populus trichocarpa
Potri.011G094100 2.0kb downstream 2.0kb downstream 17317 true Chr11: 11444506-11461822 Populus trichocarpa
Potri.011G094100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 11459823-11461822 Populus trichocarpa
Potri.011G094100 5.0kb upstream 5.0kb upstream 20317 true Chr11: 11439506-11459822 Populus trichocarpa
Potri.011G094100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 11439506-11444505 Populus trichocarpa
Potri.011G094100 5.0kb downstream 5.0kb downstream 20317 true Chr11: 11444506-11464822 Populus trichocarpa
Potri.011G094100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 11459823-11464822 Populus trichocarpa
Potri.011G094100 10.0kb upstream 10.0kb upstream 25317 true Chr11: 11434506-11459822 Populus trichocarpa
Potri.011G094100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 11434506-11444505 Populus trichocarpa
Potri.011G094100 10.0kb downstream 10.0kb downstream 25317 true Chr11: 11444506-11469822 Populus trichocarpa
Potri.011G094100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 11459823-11469822 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.888        
cufflinks 0.834        
cufflinks 2.546       High
cufflinks 1.422        
cufflinks 1.444        
cufflinks 0.866        
cufflinks 1.593        
cufflinks 1.501        
cufflinks 1.61        
cufflinks 0.907        
cufflinks 1.344        
cufflinks 0.961        
cufflinks 1.18        
cufflinks 0.737       Low
cufflinks 0.632       Low
cufflinks 2.475       High
cufflinks 0.881        
cufflinks 2.782       High
cufflinks 0.6       Low
cufflinks 1.219        
cufflinks 0.763       Low
cufflinks 1.141        
cufflinks 1.568        
cufflinks 1.777        
cufflinks 8.599        
cufflinks 15.908        
cufflinks 16.667       High
cufflinks 10.773        
cufflinks 10.404        
cufflinks 14.198        

0 Strain