Gene : Potri.012G085300 P. trichocarpa v3.0
Defline:  (1 of 2) PTHR23405:SF4 - PROTEIN MAK16 HOMOLOG Genomic Order:  853
Name:  ? Potri.012G085300 Secondary Identifier:  ? PAC:27048801
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.012G085300 0.5kb upstream 0.5kb upstream 3918 true Chr12: 11259928-11263845 Populus trichocarpa
Potri.012G085300 0.5kb upstream 0.5kb upstream 500 false Chr12: 11259928-11260427 Populus trichocarpa
Potri.012G085300 0.5kb downstream 0.5kb downstream 3918 true Chr12: 11260428-11264345 Populus trichocarpa
Potri.012G085300 0.5kb downstream 0.5kb downstream 500 false Chr12: 11263846-11264345 Populus trichocarpa
Potri.012G085300 1.0kb upstream 1.0kb upstream 4418 true Chr12: 11259428-11263845 Populus trichocarpa
Potri.012G085300 1.0kb upstream 1.0kb upstream 1000 false Chr12: 11259428-11260427 Populus trichocarpa
Potri.012G085300 1.0kb downstream 1.0kb downstream 4418 true Chr12: 11260428-11264845 Populus trichocarpa
Potri.012G085300 1.0kb downstream 1.0kb downstream 1000 false Chr12: 11263846-11264845 Populus trichocarpa
Potri.012G085300 2.0kb upstream 2.0kb upstream 5418 true Chr12: 11258428-11263845 Populus trichocarpa
Potri.012G085300 2.0kb upstream 2.0kb upstream 2000 false Chr12: 11258428-11260427 Populus trichocarpa
Potri.012G085300 2.0kb downstream 2.0kb downstream 5418 true Chr12: 11260428-11265845 Populus trichocarpa
Potri.012G085300 2.0kb downstream 2.0kb downstream 2000 false Chr12: 11263846-11265845 Populus trichocarpa
Potri.012G085300 5.0kb upstream 5.0kb upstream 8418 true Chr12: 11255428-11263845 Populus trichocarpa
Potri.012G085300 5.0kb upstream 5.0kb upstream 5000 false Chr12: 11255428-11260427 Populus trichocarpa
Potri.012G085300 5.0kb downstream 5.0kb downstream 8418 true Chr12: 11260428-11268845 Populus trichocarpa
Potri.012G085300 5.0kb downstream 5.0kb downstream 5000 false Chr12: 11263846-11268845 Populus trichocarpa
Potri.012G085300 10.0kb upstream 10.0kb upstream 13418 true Chr12: 11250428-11263845 Populus trichocarpa
Potri.012G085300 10.0kb upstream 10.0kb upstream 10000 false Chr12: 11250428-11260427 Populus trichocarpa
Potri.012G085300 10.0kb downstream 10.0kb downstream 13418 true Chr12: 11260428-11273845 Populus trichocarpa
Potri.012G085300 10.0kb downstream 10.0kb downstream 10000 false Chr12: 11263846-11273845 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.525       Low
cufflinks 1.551       Low
cufflinks 5.461       High
cufflinks 3.895        
cufflinks 1.468       Low
cufflinks 1.479       Low
cufflinks 2.969        
cufflinks 3.62        
cufflinks 3.167        
cufflinks 4.43       High
cufflinks 2.496        
cufflinks 3.094        
cufflinks 3.283        
cufflinks 2.071        
cufflinks 1.571       Low
cufflinks 2.725        
cufflinks 2.704        
cufflinks 2.748        
cufflinks 2.287        
cufflinks 4.718       High
cufflinks 4.19       High
cufflinks 2.092        
cufflinks 2.664        
cufflinks 3.333        
cufflinks 12.047        
cufflinks 10.541        
cufflinks 8.994        
cufflinks 8.68        
cufflinks 16.167       High
cufflinks 16.941       High

0 Strain