Gene : Potri.012G082700 P. trichocarpa v3.0
Defline:  (1 of 1) K00766 - anthranilate phosphoribosyltransferase (trpD) Genomic Order:  827
Name:  ? Potri.012G082700 Secondary Identifier:  ? PAC:27049527
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa TRPSYN-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.012G082700 0.5kb upstream 0.5kb upstream 5056 true Chr12: 10975867-10980922 Populus trichocarpa
Potri.012G082700 0.5kb upstream 0.5kb upstream 500 false Chr12: 10975867-10976366 Populus trichocarpa
Potri.012G082700 0.5kb downstream 0.5kb downstream 5056 true Chr12: 10976367-10981422 Populus trichocarpa
Potri.012G082700 0.5kb downstream 0.5kb downstream 500 false Chr12: 10980923-10981422 Populus trichocarpa
Potri.012G082700 1.0kb upstream 1.0kb upstream 5556 true Chr12: 10975367-10980922 Populus trichocarpa
Potri.012G082700 1.0kb upstream 1.0kb upstream 1000 false Chr12: 10975367-10976366 Populus trichocarpa
Potri.012G082700 1.0kb downstream 1.0kb downstream 5556 true Chr12: 10976367-10981922 Populus trichocarpa
Potri.012G082700 1.0kb downstream 1.0kb downstream 1000 false Chr12: 10980923-10981922 Populus trichocarpa
Potri.012G082700 2.0kb upstream 2.0kb upstream 6556 true Chr12: 10974367-10980922 Populus trichocarpa
Potri.012G082700 2.0kb upstream 2.0kb upstream 2000 false Chr12: 10974367-10976366 Populus trichocarpa
Potri.012G082700 2.0kb downstream 2.0kb downstream 6556 true Chr12: 10976367-10982922 Populus trichocarpa
Potri.012G082700 2.0kb downstream 2.0kb downstream 2000 false Chr12: 10980923-10982922 Populus trichocarpa
Potri.012G082700 5.0kb upstream 5.0kb upstream 9556 true Chr12: 10971367-10980922 Populus trichocarpa
Potri.012G082700 5.0kb upstream 5.0kb upstream 5000 false Chr12: 10971367-10976366 Populus trichocarpa
Potri.012G082700 5.0kb downstream 5.0kb downstream 9556 true Chr12: 10976367-10985922 Populus trichocarpa
Potri.012G082700 5.0kb downstream 5.0kb downstream 5000 false Chr12: 10980923-10985922 Populus trichocarpa
Potri.012G082700 10.0kb upstream 10.0kb upstream 14556 true Chr12: 10966367-10980922 Populus trichocarpa
Potri.012G082700 10.0kb upstream 10.0kb upstream 10000 false Chr12: 10966367-10976366 Populus trichocarpa
Potri.012G082700 10.0kb downstream 10.0kb downstream 14556 true Chr12: 10976367-10990922 Populus trichocarpa
Potri.012G082700 10.0kb downstream 10.0kb downstream 10000 false Chr12: 10980923-10990922 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.427        
cufflinks 4.146       High
cufflinks 2.04        
cufflinks 1.731        
cufflinks 2.036        
cufflinks 1.24       Low
cufflinks 2.189        
cufflinks 1.844        
cufflinks 2.087        
cufflinks 1.79        
cufflinks 1.603        
cufflinks 2.848        
cufflinks 2.56        
cufflinks 2.904        
cufflinks 2.236        
cufflinks 3.231       High
cufflinks 2.02        
cufflinks 1.019       Low
cufflinks 1.217       Low
cufflinks 3.173       High
cufflinks 2.384        
cufflinks 2.771        
cufflinks 1.21       Low
cufflinks 1.381       Low
cufflinks 2.802        
cufflinks 1.382       Low
cufflinks 3.451        
cufflinks 2.45        
cufflinks 4.096        
cufflinks 2.872        

0 Strain