Gene : Potri.014G016800 P. trichocarpa v3.0
Defline:  (1 of 3) PTHR12354//PTHR12354:SF1 - INTERFERON-RELATED DEVELOPMENTAL REGULATOR // PROTEIN F58B3.6 Genomic Order:  168
Name:  ? Potri.014G016800 Secondary Identifier:  ? PAC:27032439
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.014G016800 0.5kb upstream 0.5kb upstream 4664 true Chr14: 1622974-1627637 Populus trichocarpa
Potri.014G016800 0.5kb upstream 0.5kb upstream 500 false Chr14: 1622974-1623473 Populus trichocarpa
Potri.014G016800 0.5kb downstream 0.5kb downstream 4664 true Chr14: 1623474-1628137 Populus trichocarpa
Potri.014G016800 0.5kb downstream 0.5kb downstream 500 false Chr14: 1627638-1628137 Populus trichocarpa
Potri.014G016800 1.0kb upstream 1.0kb upstream 5164 true Chr14: 1622474-1627637 Populus trichocarpa
Potri.014G016800 1.0kb upstream 1.0kb upstream 1000 false Chr14: 1622474-1623473 Populus trichocarpa
Potri.014G016800 1.0kb downstream 1.0kb downstream 5164 true Chr14: 1623474-1628637 Populus trichocarpa
Potri.014G016800 1.0kb downstream 1.0kb downstream 1000 false Chr14: 1627638-1628637 Populus trichocarpa
Potri.014G016800 2.0kb upstream 2.0kb upstream 6164 true Chr14: 1621474-1627637 Populus trichocarpa
Potri.014G016800 2.0kb upstream 2.0kb upstream 2000 false Chr14: 1621474-1623473 Populus trichocarpa
Potri.014G016800 2.0kb downstream 2.0kb downstream 6164 true Chr14: 1623474-1629637 Populus trichocarpa
Potri.014G016800 2.0kb downstream 2.0kb downstream 2000 false Chr14: 1627638-1629637 Populus trichocarpa
Potri.014G016800 5.0kb upstream 5.0kb upstream 9164 true Chr14: 1618474-1627637 Populus trichocarpa
Potri.014G016800 5.0kb upstream 5.0kb upstream 5000 false Chr14: 1618474-1623473 Populus trichocarpa
Potri.014G016800 5.0kb downstream 5.0kb downstream 9164 true Chr14: 1623474-1632637 Populus trichocarpa
Potri.014G016800 5.0kb downstream 5.0kb downstream 5000 false Chr14: 1627638-1632637 Populus trichocarpa
Potri.014G016800 10.0kb upstream 10.0kb upstream 14164 true Chr14: 1613474-1627637 Populus trichocarpa
Potri.014G016800 10.0kb upstream 10.0kb upstream 10000 false Chr14: 1613474-1623473 Populus trichocarpa
Potri.014G016800 10.0kb downstream 10.0kb downstream 14164 true Chr14: 1623474-1637637 Populus trichocarpa
Potri.014G016800 10.0kb downstream 10.0kb downstream 10000 false Chr14: 1627638-1637637 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.946       High
cufflinks 2.937        
cufflinks 6.19       High
cufflinks 2.243       Low
cufflinks 5.861       High
cufflinks 2.04       Low
cufflinks 2.563        
cufflinks 3.793        
cufflinks 5.91       High
cufflinks 3.012        
cufflinks 4.181        
cufflinks 3.81        
cufflinks 2.201       Low
cufflinks 5.349       High
cufflinks 1.732       Low
cufflinks 3.076        
cufflinks 3.531        
cufflinks 4.089        
cufflinks 2.555        
cufflinks 2.802        
cufflinks 4.351        
cufflinks 2.49        
cufflinks 3.087        
cufflinks 2.954        
cufflinks 41.942     High High
cufflinks 29.332     High Low
cufflinks 29.976     High  
cufflinks 33.662     High  
cufflinks 41.897     High High
cufflinks 36.689     High  

0 Strain