Gene : Potri.016G025000 P. trichocarpa v3.0
Defline:  (1 of 2) 1.14.13.81 - Magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase / Mg-protoporphyrin IX monomethyl ester oxidative cyclase Genomic Order:  250
Name:  ? Potri.016G025000 Secondary Identifier:  ? PAC:27012402
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa CHLOROPHYLL-SYN Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.016G025000 0.5kb upstream 0.5kb upstream 3050 true Chr16: 1408568-1411617 Populus trichocarpa
Potri.016G025000 0.5kb upstream 0.5kb upstream 500 false Chr16: 1411118-1411617 Populus trichocarpa
Potri.016G025000 0.5kb downstream 0.5kb downstream 3050 true Chr16: 1408068-1411117 Populus trichocarpa
Potri.016G025000 0.5kb downstream 0.5kb downstream 500 false Chr16: 1408068-1408567 Populus trichocarpa
Potri.016G025000 1.0kb upstream 1.0kb upstream 3550 true Chr16: 1408568-1412117 Populus trichocarpa
Potri.016G025000 1.0kb upstream 1.0kb upstream 1000 false Chr16: 1411118-1412117 Populus trichocarpa
Potri.016G025000 1.0kb downstream 1.0kb downstream 3550 true Chr16: 1407568-1411117 Populus trichocarpa
Potri.016G025000 1.0kb downstream 1.0kb downstream 1000 false Chr16: 1407568-1408567 Populus trichocarpa
Potri.016G025000 2.0kb upstream 2.0kb upstream 4550 true Chr16: 1408568-1413117 Populus trichocarpa
Potri.016G025000 2.0kb upstream 2.0kb upstream 2000 false Chr16: 1411118-1413117 Populus trichocarpa
Potri.016G025000 2.0kb downstream 2.0kb downstream 4550 true Chr16: 1406568-1411117 Populus trichocarpa
Potri.016G025000 2.0kb downstream 2.0kb downstream 2000 false Chr16: 1406568-1408567 Populus trichocarpa
Potri.016G025000 5.0kb upstream 5.0kb upstream 7550 true Chr16: 1408568-1416117 Populus trichocarpa
Potri.016G025000 5.0kb upstream 5.0kb upstream 5000 false Chr16: 1411118-1416117 Populus trichocarpa
Potri.016G025000 5.0kb downstream 5.0kb downstream 7550 true Chr16: 1403568-1411117 Populus trichocarpa
Potri.016G025000 5.0kb downstream 5.0kb downstream 5000 false Chr16: 1403568-1408567 Populus trichocarpa
Potri.016G025000 10.0kb upstream 10.0kb upstream 12550 true Chr16: 1408568-1421117 Populus trichocarpa
Potri.016G025000 10.0kb upstream 10.0kb upstream 10000 false Chr16: 1411118-1421117 Populus trichocarpa
Potri.016G025000 10.0kb downstream 10.0kb downstream 12550 true Chr16: 1398568-1411117 Populus trichocarpa
Potri.016G025000 10.0kb downstream 10.0kb downstream 10000 false Chr16: 1398568-1408567 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.061        
cufflinks 84.362     High High
cufflinks 14.101     High  
cufflinks 21.579     High  
cufflinks 2.798       Low
cufflinks 92.313     High High
cufflinks 14.152     High  
cufflinks 20.142     High  
cufflinks 51.353     High  
cufflinks 8.024        
cufflinks 30.54     High  
cufflinks 14.033     High  
cufflinks 69.133     High High
cufflinks 0.922       Low
cufflinks 76.085     High High
cufflinks 2.892       Low
cufflinks 95.927     High High
cufflinks 2.003       Low
cufflinks 19.442     High  
cufflinks 34.643     High  
cufflinks 7.071        
cufflinks 19.223     High  
cufflinks 41.138     High  
cufflinks 18.186     High  
cufflinks 98.22     High  
cufflinks 245.682     High High
cufflinks 256.212     High High
cufflinks 119.207     High  
cufflinks 90.092     High  
cufflinks 147.703     High  

0 Strain