Gene : Potri.016G068800 P. trichocarpa v3.0
Defline:  (1 of 1) PF12739 - ER-Golgi trafficking TRAPP I complex 85 kDa subunit (TRAPPC-Trs85) Genomic Order:  688
Name:  ? Potri.016G068800 Secondary Identifier:  ? PAC:27013183
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.016G068800 0.5kb upstream 0.5kb upstream 12216 true Chr16: 4927639-4939854 Populus trichocarpa
Potri.016G068800 0.5kb upstream 0.5kb upstream 500 false Chr16: 4939355-4939854 Populus trichocarpa
Potri.016G068800 0.5kb downstream 0.5kb downstream 12216 true Chr16: 4927139-4939354 Populus trichocarpa
Potri.016G068800 0.5kb downstream 0.5kb downstream 500 false Chr16: 4927139-4927638 Populus trichocarpa
Potri.016G068800 1.0kb upstream 1.0kb upstream 12716 true Chr16: 4927639-4940354 Populus trichocarpa
Potri.016G068800 1.0kb upstream 1.0kb upstream 1000 false Chr16: 4939355-4940354 Populus trichocarpa
Potri.016G068800 1.0kb downstream 1.0kb downstream 12716 true Chr16: 4926639-4939354 Populus trichocarpa
Potri.016G068800 1.0kb downstream 1.0kb downstream 1000 false Chr16: 4926639-4927638 Populus trichocarpa
Potri.016G068800 2.0kb upstream 2.0kb upstream 13716 true Chr16: 4927639-4941354 Populus trichocarpa
Potri.016G068800 2.0kb upstream 2.0kb upstream 2000 false Chr16: 4939355-4941354 Populus trichocarpa
Potri.016G068800 2.0kb downstream 2.0kb downstream 13716 true Chr16: 4925639-4939354 Populus trichocarpa
Potri.016G068800 2.0kb downstream 2.0kb downstream 2000 false Chr16: 4925639-4927638 Populus trichocarpa
Potri.016G068800 5.0kb upstream 5.0kb upstream 16716 true Chr16: 4927639-4944354 Populus trichocarpa
Potri.016G068800 5.0kb upstream 5.0kb upstream 5000 false Chr16: 4939355-4944354 Populus trichocarpa
Potri.016G068800 5.0kb downstream 5.0kb downstream 16716 true Chr16: 4922639-4939354 Populus trichocarpa
Potri.016G068800 5.0kb downstream 5.0kb downstream 5000 false Chr16: 4922639-4927638 Populus trichocarpa
Potri.016G068800 10.0kb upstream 10.0kb upstream 21716 true Chr16: 4927639-4949354 Populus trichocarpa
Potri.016G068800 10.0kb upstream 10.0kb upstream 10000 false Chr16: 4939355-4949354 Populus trichocarpa
Potri.016G068800 10.0kb downstream 10.0kb downstream 21716 true Chr16: 4917639-4939354 Populus trichocarpa
Potri.016G068800 10.0kb downstream 10.0kb downstream 10000 false Chr16: 4917639-4927638 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.141       High
cufflinks 1.027        
cufflinks 0.625       Low
cufflinks 0.627       Low
cufflinks 0.865        
cufflinks 0.838        
cufflinks 0.674       Low
cufflinks 0.638       Low
cufflinks 0.706       Low
cufflinks 1.592       High
cufflinks 0.758        
cufflinks 1.096        
cufflinks 0.705       Low
cufflinks 1.122        
cufflinks 1.068        
cufflinks 1.062        
cufflinks 0.931        
cufflinks 0.75        
cufflinks 0.953        
cufflinks 0.992        
cufflinks 0.866        
cufflinks 1.057        
cufflinks 1.117        
cufflinks 0.935        
cufflinks 27.484        
cufflinks 28.604     High  
cufflinks 27.002     High  
cufflinks 24.953        
cufflinks 22.167        
cufflinks 29.804     High  

0 Strain