Gene : Potri.016G095900 P. trichocarpa v3.0
Defline:  (1 of 1) 2.4.99.12 - Lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase / Lipid IV(A) KDO transferase Genomic Order:  959
Name:  ? Potri.016G095900 Secondary Identifier:  ? PAC:27013965
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa KDOSYN-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.016G095900 0.5kb upstream 0.5kb upstream 8337 true Chr16: 9155706-9164042 Populus trichocarpa
Potri.016G095900 0.5kb upstream 0.5kb upstream 500 false Chr16: 9155706-9156205 Populus trichocarpa
Potri.016G095900 0.5kb downstream 0.5kb downstream 8337 true Chr16: 9156206-9164542 Populus trichocarpa
Potri.016G095900 0.5kb downstream 0.5kb downstream 500 false Chr16: 9164043-9164542 Populus trichocarpa
Potri.016G095900 1.0kb upstream 1.0kb upstream 8837 true Chr16: 9155206-9164042 Populus trichocarpa
Potri.016G095900 1.0kb upstream 1.0kb upstream 1000 false Chr16: 9155206-9156205 Populus trichocarpa
Potri.016G095900 1.0kb downstream 1.0kb downstream 8837 true Chr16: 9156206-9165042 Populus trichocarpa
Potri.016G095900 1.0kb downstream 1.0kb downstream 1000 false Chr16: 9164043-9165042 Populus trichocarpa
Potri.016G095900 2.0kb upstream 2.0kb upstream 9837 true Chr16: 9154206-9164042 Populus trichocarpa
Potri.016G095900 2.0kb upstream 2.0kb upstream 2000 false Chr16: 9154206-9156205 Populus trichocarpa
Potri.016G095900 2.0kb downstream 2.0kb downstream 9837 true Chr16: 9156206-9166042 Populus trichocarpa
Potri.016G095900 2.0kb downstream 2.0kb downstream 2000 false Chr16: 9164043-9166042 Populus trichocarpa
Potri.016G095900 5.0kb upstream 5.0kb upstream 12837 true Chr16: 9151206-9164042 Populus trichocarpa
Potri.016G095900 5.0kb upstream 5.0kb upstream 5000 false Chr16: 9151206-9156205 Populus trichocarpa
Potri.016G095900 5.0kb downstream 5.0kb downstream 12837 true Chr16: 9156206-9169042 Populus trichocarpa
Potri.016G095900 5.0kb downstream 5.0kb downstream 5000 false Chr16: 9164043-9169042 Populus trichocarpa
Potri.016G095900 10.0kb upstream 10.0kb upstream 17837 true Chr16: 9146206-9164042 Populus trichocarpa
Potri.016G095900 10.0kb upstream 10.0kb upstream 10000 false Chr16: 9146206-9156205 Populus trichocarpa
Potri.016G095900 10.0kb downstream 10.0kb downstream 17837 true Chr16: 9156206-9174042 Populus trichocarpa
Potri.016G095900 10.0kb downstream 10.0kb downstream 10000 false Chr16: 9164043-9174042 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.384        
cufflinks 0.252       Low
cufflinks 0.386        
cufflinks 0.438        
cufflinks 0.509        
cufflinks 0.532        
cufflinks 0.357        
cufflinks 0.41        
cufflinks 0.388        
cufflinks 0.36        
cufflinks 0.315        
cufflinks 0.643       High
cufflinks 0.284       Low
cufflinks 0.314        
cufflinks 0.297        
cufflinks 0.495        
cufflinks 1.021       High
cufflinks 0.347        
cufflinks 0.509        
cufflinks 0.564        
cufflinks 0.177       Low
cufflinks 0.551        
cufflinks 0.429        
cufflinks 0.545        
cufflinks 4.615       High
cufflinks 2.406       Low
cufflinks 2.834        
cufflinks 4.985       High
cufflinks 4.582       High
cufflinks 2.953        

0 Strain