Gene : Potri.017G057700 P. trichocarpa v3.0
Defline:  (1 of 3) K01874 - methionyl-tRNA synthetase (MARS, metG) Genomic Order:  577
Name:  ? Potri.017G057700 Secondary Identifier:  ? PAC:26984214
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa TRNA-CHARGING-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.017G057700 0.5kb upstream 0.5kb upstream 7114 true Chr17: 5225486-5232599 Populus trichocarpa
Potri.017G057700 0.5kb upstream 0.5kb upstream 500 false Chr17: 5232100-5232599 Populus trichocarpa
Potri.017G057700 0.5kb downstream 0.5kb downstream 7114 true Chr17: 5224986-5232099 Populus trichocarpa
Potri.017G057700 0.5kb downstream 0.5kb downstream 500 false Chr17: 5224986-5225485 Populus trichocarpa
Potri.017G057700 1.0kb upstream 1.0kb upstream 7614 true Chr17: 5225486-5233099 Populus trichocarpa
Potri.017G057700 1.0kb upstream 1.0kb upstream 1000 false Chr17: 5232100-5233099 Populus trichocarpa
Potri.017G057700 1.0kb downstream 1.0kb downstream 7614 true Chr17: 5224486-5232099 Populus trichocarpa
Potri.017G057700 1.0kb downstream 1.0kb downstream 1000 false Chr17: 5224486-5225485 Populus trichocarpa
Potri.017G057700 2.0kb upstream 2.0kb upstream 8614 true Chr17: 5225486-5234099 Populus trichocarpa
Potri.017G057700 2.0kb upstream 2.0kb upstream 2000 false Chr17: 5232100-5234099 Populus trichocarpa
Potri.017G057700 2.0kb downstream 2.0kb downstream 8614 true Chr17: 5223486-5232099 Populus trichocarpa
Potri.017G057700 2.0kb downstream 2.0kb downstream 2000 false Chr17: 5223486-5225485 Populus trichocarpa
Potri.017G057700 5.0kb upstream 5.0kb upstream 11614 true Chr17: 5225486-5237099 Populus trichocarpa
Potri.017G057700 5.0kb upstream 5.0kb upstream 5000 false Chr17: 5232100-5237099 Populus trichocarpa
Potri.017G057700 5.0kb downstream 5.0kb downstream 11614 true Chr17: 5220486-5232099 Populus trichocarpa
Potri.017G057700 5.0kb downstream 5.0kb downstream 5000 false Chr17: 5220486-5225485 Populus trichocarpa
Potri.017G057700 10.0kb upstream 10.0kb upstream 16614 true Chr17: 5225486-5242099 Populus trichocarpa
Potri.017G057700 10.0kb upstream 10.0kb upstream 10000 false Chr17: 5232100-5242099 Populus trichocarpa
Potri.017G057700 10.0kb downstream 10.0kb downstream 16614 true Chr17: 5215486-5232099 Populus trichocarpa
Potri.017G057700 10.0kb downstream 10.0kb downstream 10000 false Chr17: 5215486-5225485 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.395        
cufflinks 2.288        
cufflinks 3.079        
cufflinks 3.521        
cufflinks 2.721        
cufflinks 2.355        
cufflinks 4.397       High
cufflinks 1.542       Low
cufflinks 2.841        
cufflinks 3.405        
cufflinks 3.02        
cufflinks 3.586        
cufflinks 1.95       Low
cufflinks 1.839       Low
cufflinks 3.884        
cufflinks 3.935        
cufflinks 3.748        
cufflinks 2.208       Low
cufflinks 3.706        
cufflinks 4.267       High
cufflinks 3.498        
cufflinks 3.437        
cufflinks 4.67       High
cufflinks 3.31        
cufflinks 35.217     High  
cufflinks 35.468     High  
cufflinks 34.893     High  
cufflinks 46.002     High High
cufflinks 43.499     High  
cufflinks 28.742     High  

0 Strain