Gene : Potri.017G114600 P. trichocarpa v3.0
Defline:  (1 of 3) K01602 - ribulose-bisphosphate carboxylase small chain (rbcS) Genomic Order:  1146
Name:  ? Potri.017G114600 Secondary Identifier:  ? PAC:26983585
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5723 Populus trichocarpa pathologic  
Ptrichocarpa PHOTOALL-PWY Populus trichocarpa pathologic  
Ptrichocarpa CALVIN-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.017G114600 0.5kb upstream 0.5kb upstream 2201 true Chr17: 13012318-13014518 Populus trichocarpa
Potri.017G114600 0.5kb upstream 0.5kb upstream 500 false Chr17: 13012318-13012817 Populus trichocarpa
Potri.017G114600 0.5kb downstream 0.5kb downstream 2201 true Chr17: 13012818-13015018 Populus trichocarpa
Potri.017G114600 0.5kb downstream 0.5kb downstream 500 false Chr17: 13014519-13015018 Populus trichocarpa
Potri.017G114600 1.0kb upstream 1.0kb upstream 2701 true Chr17: 13011818-13014518 Populus trichocarpa
Potri.017G114600 1.0kb upstream 1.0kb upstream 1000 false Chr17: 13011818-13012817 Populus trichocarpa
Potri.017G114600 1.0kb downstream 1.0kb downstream 2701 true Chr17: 13012818-13015518 Populus trichocarpa
Potri.017G114600 1.0kb downstream 1.0kb downstream 1000 false Chr17: 13014519-13015518 Populus trichocarpa
Potri.017G114600 2.0kb upstream 2.0kb upstream 3701 true Chr17: 13010818-13014518 Populus trichocarpa
Potri.017G114600 2.0kb upstream 2.0kb upstream 2000 false Chr17: 13010818-13012817 Populus trichocarpa
Potri.017G114600 2.0kb downstream 2.0kb downstream 3701 true Chr17: 13012818-13016518 Populus trichocarpa
Potri.017G114600 2.0kb downstream 2.0kb downstream 2000 false Chr17: 13014519-13016518 Populus trichocarpa
Potri.017G114600 5.0kb upstream 5.0kb upstream 6701 true Chr17: 13007818-13014518 Populus trichocarpa
Potri.017G114600 5.0kb upstream 5.0kb upstream 5000 false Chr17: 13007818-13012817 Populus trichocarpa
Potri.017G114600 5.0kb downstream 5.0kb downstream 6701 true Chr17: 13012818-13019518 Populus trichocarpa
Potri.017G114600 5.0kb downstream 5.0kb downstream 5000 false Chr17: 13014519-13019518 Populus trichocarpa
Potri.017G114600 10.0kb upstream 10.0kb upstream 11701 true Chr17: 13002818-13014518 Populus trichocarpa
Potri.017G114600 10.0kb upstream 10.0kb upstream 10000 false Chr17: 13002818-13012817 Populus trichocarpa
Potri.017G114600 10.0kb downstream 10.0kb downstream 11701 true Chr17: 13012818-13024518 Populus trichocarpa
Potri.017G114600 10.0kb downstream 10.0kb downstream 10000 false Chr17: 13014519-13024518 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.707       Low
cufflinks 2505.27     High High
cufflinks 0.781       Low
cufflinks 1595.77     High  
cufflinks 91.669     High  
cufflinks 598.027     High  
cufflinks 67.724     High  
cufflinks 0.922       Low
cufflinks 99.791     High  
cufflinks 550.188     High  
cufflinks 1086.76     High  
cufflinks 189.013     High  
cufflinks 605.748     High  
cufflinks 188.064     High  
cufflinks 1515.9     High  
cufflinks 1634.74     High  
cufflinks 0.648       Low
cufflinks 63.753     High  
cufflinks 223.518     High  
cufflinks 1692.84     High  
cufflinks 111.984     High  
cufflinks 882.563     High  
cufflinks 103.416     High  
cufflinks 603.572     High  
cufflinks 342.187     High  
cufflinks 321.771     High  
cufflinks 353.34     High  
cufflinks 325.338     High  
cufflinks 253.622     High Low
cufflinks 280.765     High  

0 Strain