Gene : Potri.017G051800 P. trichocarpa v3.0
Defline:  (1 of 1) PTHR32332:SF20 - 2-NITROPROPANE DIOXYGENASE-LIKE PROTEIN Genomic Order:  518
Name:  ? Potri.017G051800 Secondary Identifier:  ? PAC:26984093
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5971 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5973 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7663 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6282 Populus trichocarpa pathologic  
Ptrichocarpa FASYN-ELONG-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-5989 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5156 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.017G051800 0.5kb upstream 0.5kb upstream 4188 true Chr17: 4385251-4389438 Populus trichocarpa
Potri.017G051800 0.5kb upstream 0.5kb upstream 500 false Chr17: 4385251-4385750 Populus trichocarpa
Potri.017G051800 0.5kb downstream 0.5kb downstream 4188 true Chr17: 4385751-4389938 Populus trichocarpa
Potri.017G051800 0.5kb downstream 0.5kb downstream 500 false Chr17: 4389439-4389938 Populus trichocarpa
Potri.017G051800 1.0kb upstream 1.0kb upstream 4688 true Chr17: 4384751-4389438 Populus trichocarpa
Potri.017G051800 1.0kb upstream 1.0kb upstream 1000 false Chr17: 4384751-4385750 Populus trichocarpa
Potri.017G051800 1.0kb downstream 1.0kb downstream 4688 true Chr17: 4385751-4390438 Populus trichocarpa
Potri.017G051800 1.0kb downstream 1.0kb downstream 1000 false Chr17: 4389439-4390438 Populus trichocarpa
Potri.017G051800 2.0kb upstream 2.0kb upstream 5688 true Chr17: 4383751-4389438 Populus trichocarpa
Potri.017G051800 2.0kb upstream 2.0kb upstream 2000 false Chr17: 4383751-4385750 Populus trichocarpa
Potri.017G051800 2.0kb downstream 2.0kb downstream 5688 true Chr17: 4385751-4391438 Populus trichocarpa
Potri.017G051800 2.0kb downstream 2.0kb downstream 2000 false Chr17: 4389439-4391438 Populus trichocarpa
Potri.017G051800 5.0kb upstream 5.0kb upstream 8688 true Chr17: 4380751-4389438 Populus trichocarpa
Potri.017G051800 5.0kb upstream 5.0kb upstream 5000 false Chr17: 4380751-4385750 Populus trichocarpa
Potri.017G051800 5.0kb downstream 5.0kb downstream 8688 true Chr17: 4385751-4394438 Populus trichocarpa
Potri.017G051800 5.0kb downstream 5.0kb downstream 5000 false Chr17: 4389439-4394438 Populus trichocarpa
Potri.017G051800 10.0kb upstream 10.0kb upstream 13688 true Chr17: 4375751-4389438 Populus trichocarpa
Potri.017G051800 10.0kb upstream 10.0kb upstream 10000 false Chr17: 4375751-4385750 Populus trichocarpa
Potri.017G051800 10.0kb downstream 10.0kb downstream 13688 true Chr17: 4385751-4399438 Populus trichocarpa
Potri.017G051800 10.0kb downstream 10.0kb downstream 10000 false Chr17: 4389439-4399438 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.576       Low
cufflinks 5.302       High
cufflinks 3.318        
cufflinks 2.08        
cufflinks 1.204        
cufflinks 2.052        
cufflinks 3.316        
cufflinks 4.016       High
cufflinks 0.611       Low
cufflinks 1.737        
cufflinks 2.173        
cufflinks 1.104        
cufflinks 1.214        
cufflinks 2.667        
cufflinks 3.163        
cufflinks 0.789       Low
cufflinks 1.817        
cufflinks 1.711        
cufflinks 10.41       High
cufflinks 0.826       Low
cufflinks 0.665       Low
cufflinks 1.903        
cufflinks 2.37        
cufflinks 0.866        
cufflinks 10.806        
cufflinks 3.573       Low
cufflinks 2.893       Low
cufflinks 6.364        
cufflinks 7.522        
cufflinks 6.282        

0 Strain