Gene : Potri.017G062400 P. trichocarpa v3.0
Defline:  (1 of 3) PTHR28141//PTHR28141:SF1 - FAMILY NOT NAMED // 2',3'-CYCLIC-NUCLEOTIDE 3'-PHOSPHODIESTERASE Genomic Order:  624
Name:  ? Potri.017G062400 Secondary Identifier:  ? PAC:26984728
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.017G062400 0.5kb upstream 0.5kb upstream 1573 true Chr17: 5818160-5819732 Populus trichocarpa
Potri.017G062400 0.5kb upstream 0.5kb upstream 500 false Chr17: 5819233-5819732 Populus trichocarpa
Potri.017G062400 0.5kb downstream 0.5kb downstream 1573 true Chr17: 5817660-5819232 Populus trichocarpa
Potri.017G062400 0.5kb downstream 0.5kb downstream 500 false Chr17: 5817660-5818159 Populus trichocarpa
Potri.017G062400 1.0kb upstream 1.0kb upstream 2073 true Chr17: 5818160-5820232 Populus trichocarpa
Potri.017G062400 1.0kb upstream 1.0kb upstream 1000 false Chr17: 5819233-5820232 Populus trichocarpa
Potri.017G062400 1.0kb downstream 1.0kb downstream 2073 true Chr17: 5817160-5819232 Populus trichocarpa
Potri.017G062400 1.0kb downstream 1.0kb downstream 1000 false Chr17: 5817160-5818159 Populus trichocarpa
Potri.017G062400 2.0kb upstream 2.0kb upstream 3073 true Chr17: 5818160-5821232 Populus trichocarpa
Potri.017G062400 2.0kb upstream 2.0kb upstream 2000 false Chr17: 5819233-5821232 Populus trichocarpa
Potri.017G062400 2.0kb downstream 2.0kb downstream 3073 true Chr17: 5816160-5819232 Populus trichocarpa
Potri.017G062400 2.0kb downstream 2.0kb downstream 2000 false Chr17: 5816160-5818159 Populus trichocarpa
Potri.017G062400 5.0kb upstream 5.0kb upstream 6073 true Chr17: 5818160-5824232 Populus trichocarpa
Potri.017G062400 5.0kb upstream 5.0kb upstream 5000 false Chr17: 5819233-5824232 Populus trichocarpa
Potri.017G062400 5.0kb downstream 5.0kb downstream 6073 true Chr17: 5813160-5819232 Populus trichocarpa
Potri.017G062400 5.0kb downstream 5.0kb downstream 5000 false Chr17: 5813160-5818159 Populus trichocarpa
Potri.017G062400 10.0kb upstream 10.0kb upstream 11073 true Chr17: 5818160-5829232 Populus trichocarpa
Potri.017G062400 10.0kb upstream 10.0kb upstream 10000 false Chr17: 5819233-5829232 Populus trichocarpa
Potri.017G062400 10.0kb downstream 10.0kb downstream 11073 true Chr17: 5808160-5819232 Populus trichocarpa
Potri.017G062400 10.0kb downstream 10.0kb downstream 10000 false Chr17: 5808160-5818159 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 39.485     High High
cufflinks 1.439        
cufflinks 2.669        
cufflinks 1.105        
cufflinks 3.458        
cufflinks 1.42        
cufflinks 1.332        
cufflinks 0.632        
cufflinks 2.175        
cufflinks 26.815     High High
cufflinks 2.94        
cufflinks 0.662        
cufflinks 1.402        
cufflinks 0.661        
cufflinks 4.026        
cufflinks 1.087        
cufflinks 0.607       Low
cufflinks 0.64        
cufflinks 42.097     High High
cufflinks 2.257        
cufflinks 0.803        
cufflinks 1.255        
cufflinks 1.312        
cufflinks 4.218        
cufflinks 0.326     Low  
cufflinks 0.496        
cufflinks 0.717        
cufflinks 2.041        
cufflinks 3.222       High
cufflinks 0.45        

0 Strain