Gene : Potri.018G087800 P. trichocarpa v3.0
Defline:  (1 of 1) K15507 - 21S rRNA (GM2251-2'-O)-methyltransferase [EC:2.1.1.-] (MRM1, PET56) Genomic Order:  878
Name:  ? Potri.018G087800 Secondary Identifier:  ? PAC:27011035
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.018G087800 0.5kb upstream 0.5kb upstream 3153 true Chr18: 11482599-11485751 Populus trichocarpa
Potri.018G087800 0.5kb upstream 0.5kb upstream 500 false Chr18: 11485252-11485751 Populus trichocarpa
Potri.018G087800 0.5kb downstream 0.5kb downstream 3153 true Chr18: 11482099-11485251 Populus trichocarpa
Potri.018G087800 0.5kb downstream 0.5kb downstream 500 false Chr18: 11482099-11482598 Populus trichocarpa
Potri.018G087800 1.0kb upstream 1.0kb upstream 3653 true Chr18: 11482599-11486251 Populus trichocarpa
Potri.018G087800 1.0kb upstream 1.0kb upstream 1000 false Chr18: 11485252-11486251 Populus trichocarpa
Potri.018G087800 1.0kb downstream 1.0kb downstream 3653 true Chr18: 11481599-11485251 Populus trichocarpa
Potri.018G087800 1.0kb downstream 1.0kb downstream 1000 false Chr18: 11481599-11482598 Populus trichocarpa
Potri.018G087800 2.0kb upstream 2.0kb upstream 4653 true Chr18: 11482599-11487251 Populus trichocarpa
Potri.018G087800 2.0kb upstream 2.0kb upstream 2000 false Chr18: 11485252-11487251 Populus trichocarpa
Potri.018G087800 2.0kb downstream 2.0kb downstream 4653 true Chr18: 11480599-11485251 Populus trichocarpa
Potri.018G087800 2.0kb downstream 2.0kb downstream 2000 false Chr18: 11480599-11482598 Populus trichocarpa
Potri.018G087800 5.0kb upstream 5.0kb upstream 7653 true Chr18: 11482599-11490251 Populus trichocarpa
Potri.018G087800 5.0kb upstream 5.0kb upstream 5000 false Chr18: 11485252-11490251 Populus trichocarpa
Potri.018G087800 5.0kb downstream 5.0kb downstream 7653 true Chr18: 11477599-11485251 Populus trichocarpa
Potri.018G087800 5.0kb downstream 5.0kb downstream 5000 false Chr18: 11477599-11482598 Populus trichocarpa
Potri.018G087800 10.0kb upstream 10.0kb upstream 12653 true Chr18: 11482599-11495251 Populus trichocarpa
Potri.018G087800 10.0kb upstream 10.0kb upstream 10000 false Chr18: 11485252-11495251 Populus trichocarpa
Potri.018G087800 10.0kb downstream 10.0kb downstream 12653 true Chr18: 11472599-11485251 Populus trichocarpa
Potri.018G087800 10.0kb downstream 10.0kb downstream 10000 false Chr18: 11472599-11482598 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.086       Low
cufflinks 15.278     High High
cufflinks 6.324        
cufflinks 8.204        
cufflinks 2.037       Low
cufflinks 4.412        
cufflinks 3.303        
cufflinks 9.211        
cufflinks 8.417     High  
cufflinks 5.402        
cufflinks 1.612       Low
cufflinks 2.202       Low
cufflinks 6.705        
cufflinks 8.492        
cufflinks 1.129       Low
cufflinks 6.051        
cufflinks 7.862        
cufflinks 1.936       Low
cufflinks 6.641        
cufflinks 10.566     High High
cufflinks 6.364        
cufflinks 4.39        
cufflinks 8.235        
cufflinks 8.938     High  
cufflinks 8.649        
cufflinks 12.638       High
cufflinks 7.151        
cufflinks 10.678        
cufflinks 9.387        
cufflinks 9.144        

0 Strain