Gene : Potri.018G116500 P. trichocarpa v3.0
Defline:  (1 of 2) 2.1.1.220 - tRNA (adenine(58)-N(1))-methyltransferase / tRNA m(1)A(58) methyltransferase Genomic Order:  1165
Name:  ? Potri.018G116500 Secondary Identifier:  ? PAC:27010134
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-6829 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.018G116500 0.5kb upstream 0.5kb upstream 4587 true Chr18: 14082883-14087469 Populus trichocarpa
Potri.018G116500 0.5kb upstream 0.5kb upstream 500 false Chr18: 14082883-14083382 Populus trichocarpa
Potri.018G116500 0.5kb downstream 0.5kb downstream 4587 true Chr18: 14083383-14087969 Populus trichocarpa
Potri.018G116500 0.5kb downstream 0.5kb downstream 500 false Chr18: 14087470-14087969 Populus trichocarpa
Potri.018G116500 1.0kb upstream 1.0kb upstream 5087 true Chr18: 14082383-14087469 Populus trichocarpa
Potri.018G116500 1.0kb upstream 1.0kb upstream 1000 false Chr18: 14082383-14083382 Populus trichocarpa
Potri.018G116500 1.0kb downstream 1.0kb downstream 5087 true Chr18: 14083383-14088469 Populus trichocarpa
Potri.018G116500 1.0kb downstream 1.0kb downstream 1000 false Chr18: 14087470-14088469 Populus trichocarpa
Potri.018G116500 2.0kb upstream 2.0kb upstream 6087 true Chr18: 14081383-14087469 Populus trichocarpa
Potri.018G116500 2.0kb upstream 2.0kb upstream 2000 false Chr18: 14081383-14083382 Populus trichocarpa
Potri.018G116500 2.0kb downstream 2.0kb downstream 6087 true Chr18: 14083383-14089469 Populus trichocarpa
Potri.018G116500 2.0kb downstream 2.0kb downstream 2000 false Chr18: 14087470-14089469 Populus trichocarpa
Potri.018G116500 5.0kb upstream 5.0kb upstream 9087 true Chr18: 14078383-14087469 Populus trichocarpa
Potri.018G116500 5.0kb upstream 5.0kb upstream 5000 false Chr18: 14078383-14083382 Populus trichocarpa
Potri.018G116500 5.0kb downstream 5.0kb downstream 9087 true Chr18: 14083383-14092469 Populus trichocarpa
Potri.018G116500 5.0kb downstream 5.0kb downstream 5000 false Chr18: 14087470-14092469 Populus trichocarpa
Potri.018G116500 10.0kb upstream 10.0kb upstream 14087 true Chr18: 14073383-14087469 Populus trichocarpa
Potri.018G116500 10.0kb upstream 10.0kb upstream 10000 false Chr18: 14073383-14083382 Populus trichocarpa
Potri.018G116500 10.0kb downstream 10.0kb downstream 14087 true Chr18: 14083383-14097469 Populus trichocarpa
Potri.018G116500 10.0kb downstream 10.0kb downstream 10000 false Chr18: 14087470-14097469 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.658        
cufflinks 1.282        
cufflinks 1.833        
cufflinks 6.408       High
cufflinks 4.029       High
cufflinks 2.455        
cufflinks 2.444        
cufflinks 2.074        
cufflinks 2.57        
cufflinks 2.176        
cufflinks 1.198        
cufflinks 1.765        
cufflinks 2.11        
cufflinks 1.952        
cufflinks 2.601        
cufflinks 2.211        
cufflinks 2.25        
cufflinks 0.611       Low
cufflinks 3.19        
cufflinks 1.492        
cufflinks 0.839       Low
cufflinks 2.077        
cufflinks 0.286       Low
cufflinks 1.51        
cufflinks 7.766        
cufflinks 9.747        
cufflinks 10.688        
cufflinks 12.395        
cufflinks 12.905        
cufflinks 9.439        

0 Strain