Gene : Potri.019G044200 P. trichocarpa v3.0
Defline:  (1 of 2) PTHR30603//PTHR30603:SF25 - RNA POLYMERASE SIGMA FACTOR RPO // SUBFAMILY NOT NAMED Genomic Order:  442
Name:  ? Potri.019G044200 Secondary Identifier:  ? PAC:27025299
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.019G044200 0.5kb upstream 0.5kb upstream 6680 true Chr19: 5196762-5203441 Populus trichocarpa
Potri.019G044200 0.5kb upstream 0.5kb upstream 500 false Chr19: 5196762-5197261 Populus trichocarpa
Potri.019G044200 0.5kb downstream 0.5kb downstream 6680 true Chr19: 5197262-5203941 Populus trichocarpa
Potri.019G044200 0.5kb downstream 0.5kb downstream 500 false Chr19: 5203442-5203941 Populus trichocarpa
Potri.019G044200 1.0kb upstream 1.0kb upstream 7180 true Chr19: 5196262-5203441 Populus trichocarpa
Potri.019G044200 1.0kb upstream 1.0kb upstream 1000 false Chr19: 5196262-5197261 Populus trichocarpa
Potri.019G044200 1.0kb downstream 1.0kb downstream 7180 true Chr19: 5197262-5204441 Populus trichocarpa
Potri.019G044200 1.0kb downstream 1.0kb downstream 1000 false Chr19: 5203442-5204441 Populus trichocarpa
Potri.019G044200 2.0kb upstream 2.0kb upstream 8180 true Chr19: 5195262-5203441 Populus trichocarpa
Potri.019G044200 2.0kb upstream 2.0kb upstream 2000 false Chr19: 5195262-5197261 Populus trichocarpa
Potri.019G044200 2.0kb downstream 2.0kb downstream 8180 true Chr19: 5197262-5205441 Populus trichocarpa
Potri.019G044200 2.0kb downstream 2.0kb downstream 2000 false Chr19: 5203442-5205441 Populus trichocarpa
Potri.019G044200 5.0kb upstream 5.0kb upstream 11180 true Chr19: 5192262-5203441 Populus trichocarpa
Potri.019G044200 5.0kb upstream 5.0kb upstream 5000 false Chr19: 5192262-5197261 Populus trichocarpa
Potri.019G044200 5.0kb downstream 5.0kb downstream 11180 true Chr19: 5197262-5208441 Populus trichocarpa
Potri.019G044200 5.0kb downstream 5.0kb downstream 5000 false Chr19: 5203442-5208441 Populus trichocarpa
Potri.019G044200 10.0kb upstream 10.0kb upstream 16180 true Chr19: 5187262-5203441 Populus trichocarpa
Potri.019G044200 10.0kb upstream 10.0kb upstream 10000 false Chr19: 5187262-5197261 Populus trichocarpa
Potri.019G044200 10.0kb downstream 10.0kb downstream 16180 true Chr19: 5197262-5213441 Populus trichocarpa
Potri.019G044200 10.0kb downstream 10.0kb downstream 10000 false Chr19: 5203442-5213441 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.661       High
cufflinks 0.641       Low
cufflinks 0.893       Low
cufflinks 0.979        
cufflinks 2.635       High
cufflinks 1.322        
cufflinks 1.43        
cufflinks 1.732        
cufflinks 2.409        
cufflinks 1.087        
cufflinks 2.733       High
cufflinks 0.839       Low
cufflinks 4.953       High
cufflinks 0.839       Low
cufflinks 2.476        
cufflinks 2.465        
cufflinks 1.325        
cufflinks 1.892        
cufflinks 1.183        
cufflinks 0.819       Low
cufflinks 2.796       High
cufflinks 1.543        
cufflinks 1.014        
cufflinks 1.783        
cufflinks 9.273        
cufflinks 9.428        
cufflinks 9.651        
cufflinks 8.689        
cufflinks 7.497       Low
cufflinks 10.436        

0 Strain