Gene : Potri.012G114000 P. trichocarpa v3.0
Defline:  (1 of 4) K02977//K08770 - small subunit ribosomal protein S27Ae (RP-S27Ae, RPS27A) // ubiquitin C (UBC) Genomic Order:  1140
Name:  ? Potri.012G114000 Secondary Identifier:  ? PAC:27050958
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.012G114000 0.5kb upstream 0.5kb upstream 1781 true Chr12: 13462066-13463846 Populus trichocarpa
Potri.012G114000 0.5kb upstream 0.5kb upstream 500 false Chr12: 13463347-13463846 Populus trichocarpa
Potri.012G114000 0.5kb downstream 0.5kb downstream 1781 true Chr12: 13461566-13463346 Populus trichocarpa
Potri.012G114000 0.5kb downstream 0.5kb downstream 500 false Chr12: 13461566-13462065 Populus trichocarpa
Potri.012G114000 1.0kb upstream 1.0kb upstream 2281 true Chr12: 13462066-13464346 Populus trichocarpa
Potri.012G114000 1.0kb upstream 1.0kb upstream 1000 false Chr12: 13463347-13464346 Populus trichocarpa
Potri.012G114000 1.0kb downstream 1.0kb downstream 2281 true Chr12: 13461066-13463346 Populus trichocarpa
Potri.012G114000 1.0kb downstream 1.0kb downstream 1000 false Chr12: 13461066-13462065 Populus trichocarpa
Potri.012G114000 2.0kb upstream 2.0kb upstream 3281 true Chr12: 13462066-13465346 Populus trichocarpa
Potri.012G114000 2.0kb upstream 2.0kb upstream 2000 false Chr12: 13463347-13465346 Populus trichocarpa
Potri.012G114000 2.0kb downstream 2.0kb downstream 3281 true Chr12: 13460066-13463346 Populus trichocarpa
Potri.012G114000 2.0kb downstream 2.0kb downstream 2000 false Chr12: 13460066-13462065 Populus trichocarpa
Potri.012G114000 5.0kb upstream 5.0kb upstream 6281 true Chr12: 13462066-13468346 Populus trichocarpa
Potri.012G114000 5.0kb upstream 5.0kb upstream 5000 false Chr12: 13463347-13468346 Populus trichocarpa
Potri.012G114000 5.0kb downstream 5.0kb downstream 6281 true Chr12: 13457066-13463346 Populus trichocarpa
Potri.012G114000 5.0kb downstream 5.0kb downstream 5000 false Chr12: 13457066-13462065 Populus trichocarpa
Potri.012G114000 10.0kb upstream 10.0kb upstream 11281 true Chr12: 13462066-13473346 Populus trichocarpa
Potri.012G114000 10.0kb upstream 10.0kb upstream 10000 false Chr12: 13463347-13473346 Populus trichocarpa
Potri.012G114000 10.0kb downstream 10.0kb downstream 11281 true Chr12: 13452066-13463346 Populus trichocarpa
Potri.012G114000 10.0kb downstream 10.0kb downstream 10000 false Chr12: 13452066-13462065 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 95.506     High  
cufflinks 84.425     High  
cufflinks 133.418     High  
cufflinks 104.473     High  
cufflinks 81.107     High  
cufflinks 65.509     High Low
cufflinks 176.077     High High
cufflinks 89.365     High  
cufflinks 77.044     High Low
cufflinks 94.615     High  
cufflinks 113.121     High  
cufflinks 148.308     High High
cufflinks 110.188     High  
cufflinks 96.146     High  
cufflinks 106.945     High  
cufflinks 130.941     High  
cufflinks 104.767     High  
cufflinks 96.973     High  
cufflinks 154.376     High High
cufflinks 55.671     High Low
cufflinks 104.297     High  
cufflinks 142.667     High High
cufflinks 140.914     High High
cufflinks 99.117     High  
cufflinks 30.064     High  
cufflinks 27.603     High  
cufflinks 32.726     High  
cufflinks 42.93     High  
cufflinks 61.798     High  
cufflinks 24.266        

0 Strain