Gene : Potri.019G028500 P. trichocarpa v3.0
Defline:  (1 of 2) PTHR10031//PTHR10031:SF6 - ATP SYNTHASE LIPID-BINDING PROTEIN, MITOCHONDRIAL // ATP SYNTHASE SUBUNIT C, CHLOROPLASTIC Genomic Order:  285
Name:  ? Potri.019G028500 Secondary Identifier:  ? PAC:27026521
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-7229 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6126 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7219 Populus trichocarpa pathologic  
Ptrichocarpa PWY-841 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.019G028500 0.5kb upstream 0.5kb upstream 1589 true Chr19: 3201672-3203260 Populus trichocarpa
Potri.019G028500 0.5kb upstream 0.5kb upstream 500 false Chr19: 3202761-3203260 Populus trichocarpa
Potri.019G028500 0.5kb downstream 0.5kb downstream 1589 true Chr19: 3201172-3202760 Populus trichocarpa
Potri.019G028500 0.5kb downstream 0.5kb downstream 500 false Chr19: 3201172-3201671 Populus trichocarpa
Potri.019G028500 1.0kb upstream 1.0kb upstream 2089 true Chr19: 3201672-3203760 Populus trichocarpa
Potri.019G028500 1.0kb upstream 1.0kb upstream 1000 false Chr19: 3202761-3203760 Populus trichocarpa
Potri.019G028500 1.0kb downstream 1.0kb downstream 2089 true Chr19: 3200672-3202760 Populus trichocarpa
Potri.019G028500 1.0kb downstream 1.0kb downstream 1000 false Chr19: 3200672-3201671 Populus trichocarpa
Potri.019G028500 2.0kb upstream 2.0kb upstream 3089 true Chr19: 3201672-3204760 Populus trichocarpa
Potri.019G028500 2.0kb upstream 2.0kb upstream 2000 false Chr19: 3202761-3204760 Populus trichocarpa
Potri.019G028500 2.0kb downstream 2.0kb downstream 3089 true Chr19: 3199672-3202760 Populus trichocarpa
Potri.019G028500 2.0kb downstream 2.0kb downstream 2000 false Chr19: 3199672-3201671 Populus trichocarpa
Potri.019G028500 5.0kb upstream 5.0kb upstream 6089 true Chr19: 3201672-3207760 Populus trichocarpa
Potri.019G028500 5.0kb upstream 5.0kb upstream 5000 false Chr19: 3202761-3207760 Populus trichocarpa
Potri.019G028500 5.0kb downstream 5.0kb downstream 6089 true Chr19: 3196672-3202760 Populus trichocarpa
Potri.019G028500 5.0kb downstream 5.0kb downstream 5000 false Chr19: 3196672-3201671 Populus trichocarpa
Potri.019G028500 10.0kb upstream 10.0kb upstream 11089 true Chr19: 3201672-3212760 Populus trichocarpa
Potri.019G028500 10.0kb upstream 10.0kb upstream 10000 false Chr19: 3202761-3212760 Populus trichocarpa
Potri.019G028500 10.0kb downstream 10.0kb downstream 11089 true Chr19: 3191672-3202760 Populus trichocarpa
Potri.019G028500 10.0kb downstream 10.0kb downstream 10000 false Chr19: 3191672-3201671 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.434       High
cufflinks 0.091     Low  
cufflinks 0.342        
cufflinks 0.235        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.201        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.217        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.227        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.025     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.028     Low Low
cufflinks 0.068     Low  
cufflinks 0.946       High
cufflinks 0.175        
cufflinks 0.015     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.121     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain