Gene : Potri.013G137600 P. trichocarpa v3.0
Defline:  (1 of 5) K02704 - photosystem II CP47 chlorophyll apoprotein (psbB) Genomic Order:  1376
Name:  ? Potri.013G137600 Secondary Identifier:  ? PAC:26995662
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-101 Populus trichocarpa pathologic  
Ptrichocarpa PHOTOALL-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.013G137600 0.5kb upstream 0.5kb upstream 2027 true Chr13: 14686687-14688713 Populus trichocarpa
Potri.013G137600 0.5kb upstream 0.5kb upstream 500 false Chr13: 14688214-14688713 Populus trichocarpa
Potri.013G137600 0.5kb downstream 0.5kb downstream 2027 true Chr13: 14686187-14688213 Populus trichocarpa
Potri.013G137600 0.5kb downstream 0.5kb downstream 500 false Chr13: 14686187-14686686 Populus trichocarpa
Potri.013G137600 1.0kb upstream 1.0kb upstream 2527 true Chr13: 14686687-14689213 Populus trichocarpa
Potri.013G137600 1.0kb upstream 1.0kb upstream 1000 false Chr13: 14688214-14689213 Populus trichocarpa
Potri.013G137600 1.0kb downstream 1.0kb downstream 2527 true Chr13: 14685687-14688213 Populus trichocarpa
Potri.013G137600 1.0kb downstream 1.0kb downstream 1000 false Chr13: 14685687-14686686 Populus trichocarpa
Potri.013G137600 2.0kb upstream 2.0kb upstream 3527 true Chr13: 14686687-14690213 Populus trichocarpa
Potri.013G137600 2.0kb upstream 2.0kb upstream 2000 false Chr13: 14688214-14690213 Populus trichocarpa
Potri.013G137600 2.0kb downstream 2.0kb downstream 3527 true Chr13: 14684687-14688213 Populus trichocarpa
Potri.013G137600 2.0kb downstream 2.0kb downstream 2000 false Chr13: 14684687-14686686 Populus trichocarpa
Potri.013G137600 5.0kb upstream 5.0kb upstream 6527 true Chr13: 14686687-14693213 Populus trichocarpa
Potri.013G137600 5.0kb upstream 5.0kb upstream 5000 false Chr13: 14688214-14693213 Populus trichocarpa
Potri.013G137600 5.0kb downstream 5.0kb downstream 6527 true Chr13: 14681687-14688213 Populus trichocarpa
Potri.013G137600 5.0kb downstream 5.0kb downstream 5000 false Chr13: 14681687-14686686 Populus trichocarpa
Potri.013G137600 10.0kb upstream 10.0kb upstream 11527 true Chr13: 14686687-14698213 Populus trichocarpa
Potri.013G137600 10.0kb upstream 10.0kb upstream 10000 false Chr13: 14688214-14698213 Populus trichocarpa
Potri.013G137600 10.0kb downstream 10.0kb downstream 11527 true Chr13: 14676687-14688213 Populus trichocarpa
Potri.013G137600 10.0kb downstream 10.0kb downstream 10000 false Chr13: 14676687-14686686 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.04     Low  
cufflinks 0.035     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.057     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.031     Low  
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.041     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low Low
cufflinks 0.107     Low High
cufflinks 0.01     Low Low
cufflinks 0.066     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain