Gene : Gorai.001G017900 G. raimondii v2.1
Defline:  (1 of 195) PF00010 - Helix-loop-helix DNA-binding domain (HLH) Genomic Order:  179
Name:  ? Gorai.001G017900 Secondary Identifier:  ? PAC:26819824
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.001G017900 0.5kb upstream 0.5kb upstream 2828 true Chr01: 1661509-1664336 Gossypium raimondii
Gorai.001G017900 0.5kb upstream 0.5kb upstream 500 false Chr01: 1661509-1662008 Gossypium raimondii
Gorai.001G017900 0.5kb downstream 0.5kb downstream 2828 true Chr01: 1662009-1664836 Gossypium raimondii
Gorai.001G017900 0.5kb downstream 0.5kb downstream 500 false Chr01: 1664337-1664836 Gossypium raimondii
Gorai.001G017900 1.0kb upstream 1.0kb upstream 3328 true Chr01: 1661009-1664336 Gossypium raimondii
Gorai.001G017900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 1661009-1662008 Gossypium raimondii
Gorai.001G017900 1.0kb downstream 1.0kb downstream 3328 true Chr01: 1662009-1665336 Gossypium raimondii
Gorai.001G017900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 1664337-1665336 Gossypium raimondii
Gorai.001G017900 2.0kb upstream 2.0kb upstream 4328 true Chr01: 1660009-1664336 Gossypium raimondii
Gorai.001G017900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 1660009-1662008 Gossypium raimondii
Gorai.001G017900 2.0kb downstream 2.0kb downstream 4328 true Chr01: 1662009-1666336 Gossypium raimondii
Gorai.001G017900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 1664337-1666336 Gossypium raimondii
Gorai.001G017900 5.0kb upstream 5.0kb upstream 7328 true Chr01: 1657009-1664336 Gossypium raimondii
Gorai.001G017900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 1657009-1662008 Gossypium raimondii
Gorai.001G017900 5.0kb downstream 5.0kb downstream 7328 true Chr01: 1662009-1669336 Gossypium raimondii
Gorai.001G017900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 1664337-1669336 Gossypium raimondii
Gorai.001G017900 10.0kb upstream 10.0kb upstream 12328 true Chr01: 1652009-1664336 Gossypium raimondii
Gorai.001G017900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 1652009-1662008 Gossypium raimondii
Gorai.001G017900 10.0kb downstream 10.0kb downstream 12328 true Chr01: 1662009-1674336 Gossypium raimondii
Gorai.001G017900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 1664337-1674336 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123803930 5264 Brassicales-Malvales Singleton cluster - no MSA
124300992 5266 SBM Singleton cluster - no MSA
124152046 5268 Malvidae Singleton cluster - no MSA
124071758 5270 Rosid View MSA
123628045 5271 Pentapetalae View MSA
122796346 5272 Eudicot View MSA
122050017 5273 Angiosperm View MSA
121350974 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain