Protein Family : PF00010 - Helix-loop-helix DNA-binding domain (HLH) 123628045

Method ID:  5271 Method Name:  Pentapetalae
Sequence Alignment:  View MSA Member Count:  14

14 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29739.t000120 (1 of 1) PF00010//PF00562 - Helix-loop-helix DNA-binding domain (HLH) // RNA polymerase Rpb2, domain 6 (RNA_pol_Rpb2_6) R. communis v0.1 3819   29739: 743017-746835
orange1.1g010045m.g (1 of 100) PF00010 - Helix-loop-helix DNA-binding domain (HLH) C. sinensis v1.1 3116   scaffold00013: 1294920-1298035
Ciclev10008008m.g (1 of 104) PF00010 - Helix-loop-helix DNA-binding domain (HLH) C. clementina v1.0 3932   scaffold_1: 24893716-24897647
Gorai.001G017900 (1 of 195) PF00010 - Helix-loop-helix DNA-binding domain (HLH) G. raimondii v2.1 2328   Chr01: 1662009-1664336
Gorai.009G038500 (1 of 195) PF00010 - Helix-loop-helix DNA-binding domain (HLH) G. raimondii v2.1 3493   Chr09: 2824629-2828121
Thecc1EG037455 (1 of 103) PF00010 - Helix-loop-helix DNA-binding domain (HLH) T. cacao v1.1 5759   scaffold_9: 3556333-3562091
SapurV1A.0249s0140 (1 of 193) PF00010 - Helix-loop-helix DNA-binding domain (HLH) S. purpurea v1.0 6205   chr06: 12600175-12606379
Prupe.7G191100 (1 of 110) PF00010 - Helix-loop-helix DNA-binding domain (HLH) P. persica v2.1 3333   Pp07: 18284589-18287921
Manes.16G090000 (1 of 155) PF00010 - Helix-loop-helix DNA-binding domain (HLH) M. esculenta v6.1 4641   Chromosome16: 24707196-24711836
Potri.006G135600 (1 of 174) PF00010 - Helix-loop-helix DNA-binding domain (HLH) P. trichocarpa v3.1 5703   Chr06: 11199859-11205561
Podel.06G149100 (1 of 181) PF00010 - Helix-loop-helix DNA-binding domain (HLH) P. deltoides WV94 v2.1 5595   Chr06: 12562950-12568544
VIT_211s0016g00380 (1 of 116) PF00010 - Helix-loop-helix DNA-binding domain (HLH) V. vinifera v2.1 3899   chr11: 396821-400719
MD02G1103800 (1 of 176) PF00010 - Helix-loop-helix DNA-binding domain (HLH) M. domestica v1.1 2291   Chr02: 8294287-8296577
gene35333-v2.0.a2-hybrid (1 of 99) PF00010 - Helix-loop-helix DNA-binding domain (HLH) F. vesca v2.0.a2 3318   Fvb1: 5025113-5028430

14 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Ciclev10008008m C. clementina v1.0 123628045 PF00010 - Helix-loop-helix DNA-binding domain (HLH) 1 5271 Pentapetalae
Prupe.7G191100.1.p P. persica v2.1 123628045 PF00010 - Helix-loop-helix DNA-binding domain (HLH) 1 5271 Pentapetalae
MD02G1103800 M. domestica v1.1 123628045 PF00010 - Helix-loop-helix DNA-binding domain (HLH) 1 5271 Pentapetalae
gene35333-v2.0.a2-hybrid.t1 F. vesca v2.0.a2 123628045 PF00010 - Helix-loop-helix DNA-binding domain (HLH) 1 5271 Pentapetalae
29739.m003684 R. communis v0.1 123628045 PF00010 - Helix-loop-helix DNA-binding domain (HLH) 1 5271 Pentapetalae
orange1.1g010045m C. sinensis v1.1 123628045 PF00010 - Helix-loop-helix DNA-binding domain (HLH) 1 5271 Pentapetalae
Gorai.009G038500.1 G. raimondii v2.1 123628045 PF00010 - Helix-loop-helix DNA-binding domain (HLH) 2 5271 Pentapetalae
Gorai.001G017900.1 G. raimondii v2.1 123628045 PF00010 - Helix-loop-helix DNA-binding domain (HLH) 2 5271 Pentapetalae
Thecc1EG037455t2 T. cacao v1.1 123628045 PF00010 - Helix-loop-helix DNA-binding domain (HLH) 1 5271 Pentapetalae
SapurV1A.0249s0140.1.p S. purpurea v1.0 123628045 PF00010 - Helix-loop-helix DNA-binding domain (HLH) 1 5271 Pentapetalae
Manes.16G090000.1.p M. esculenta v6.1 123628045 PF00010 - Helix-loop-helix DNA-binding domain (HLH) 1 5271 Pentapetalae
Potri.006G135600.1.p P. trichocarpa v3.1 123628045 PF00010 - Helix-loop-helix DNA-binding domain (HLH) 1 5271 Pentapetalae
Podel.06G149100.1.p P. deltoides WV94 v2.1 123628045 PF00010 - Helix-loop-helix DNA-binding domain (HLH) 1 5271 Pentapetalae
VIT_211s0016g00380.3 V. vinifera v2.1 123628045 PF00010 - Helix-loop-helix DNA-binding domain (HLH) 1 5271 Pentapetalae