Gene : Gorai.001G038600 G. raimondii v2.1
Defline:  (1 of 1) PTHR11592:SF11 - PHOSPHOLIPID HYDROPEROXIDE GLUTATHIONE PEROXIDASE 1, CHLOROPLASTIC-RELATED Genomic Order:  386
Name:  ? Gorai.001G038600 Secondary Identifier:  ? PAC:26819821
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-4081 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.001G038600 0.5kb upstream 0.5kb upstream 2751 true Chr01: 3613824-3616574 Gossypium raimondii
Gorai.001G038600 0.5kb upstream 0.5kb upstream 500 false Chr01: 3613824-3614323 Gossypium raimondii
Gorai.001G038600 0.5kb downstream 0.5kb downstream 2751 true Chr01: 3614324-3617074 Gossypium raimondii
Gorai.001G038600 0.5kb downstream 0.5kb downstream 500 false Chr01: 3616575-3617074 Gossypium raimondii
Gorai.001G038600 1.0kb upstream 1.0kb upstream 3251 true Chr01: 3613324-3616574 Gossypium raimondii
Gorai.001G038600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 3613324-3614323 Gossypium raimondii
Gorai.001G038600 1.0kb downstream 1.0kb downstream 3251 true Chr01: 3614324-3617574 Gossypium raimondii
Gorai.001G038600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 3616575-3617574 Gossypium raimondii
Gorai.001G038600 2.0kb upstream 2.0kb upstream 4251 true Chr01: 3612324-3616574 Gossypium raimondii
Gorai.001G038600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 3612324-3614323 Gossypium raimondii
Gorai.001G038600 2.0kb downstream 2.0kb downstream 4251 true Chr01: 3614324-3618574 Gossypium raimondii
Gorai.001G038600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 3616575-3618574 Gossypium raimondii
Gorai.001G038600 5.0kb upstream 5.0kb upstream 7251 true Chr01: 3609324-3616574 Gossypium raimondii
Gorai.001G038600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 3609324-3614323 Gossypium raimondii
Gorai.001G038600 5.0kb downstream 5.0kb downstream 7251 true Chr01: 3614324-3621574 Gossypium raimondii
Gorai.001G038600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 3616575-3621574 Gossypium raimondii
Gorai.001G038600 10.0kb upstream 10.0kb upstream 12251 true Chr01: 3604324-3616574 Gossypium raimondii
Gorai.001G038600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 3604324-3614323 Gossypium raimondii
Gorai.001G038600 10.0kb downstream 10.0kb downstream 12251 true Chr01: 3614324-3626574 Gossypium raimondii
Gorai.001G038600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 3616575-3626574 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838768 5264 Brassicales-Malvales View MSA
124342773 5266 SBM View MSA
124240030 5268 Malvidae View MSA
124063282 5270 Rosid View MSA
123740898 5271 Pentapetalae View MSA
122792011 5272 Eudicot View MSA
122046042 5273 Angiosperm View MSA
121349724 5274 Embryophyte View MSA
123426849 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain