Gene : Gorai.001G080700 G. raimondii v2.1
Defline:  (1 of 3) PTHR11999//PTHR11999:SF88 - GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE Genomic Order:  807
Name:  ? Gorai.001G080700 Secondary Identifier:  ? PAC:26825008
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-5864 Gossypium raimondii pathologic  
Graimondii PWY-5886 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.001G080700 0.5kb upstream 0.5kb upstream 1982 true Chr01: 8533596-8535577 Gossypium raimondii
Gorai.001G080700 0.5kb upstream 0.5kb upstream 500 false Chr01: 8535078-8535577 Gossypium raimondii
Gorai.001G080700 0.5kb downstream 0.5kb downstream 1982 true Chr01: 8533096-8535077 Gossypium raimondii
Gorai.001G080700 0.5kb downstream 0.5kb downstream 500 false Chr01: 8533096-8533595 Gossypium raimondii
Gorai.001G080700 1.0kb upstream 1.0kb upstream 2482 true Chr01: 8533596-8536077 Gossypium raimondii
Gorai.001G080700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 8535078-8536077 Gossypium raimondii
Gorai.001G080700 1.0kb downstream 1.0kb downstream 2482 true Chr01: 8532596-8535077 Gossypium raimondii
Gorai.001G080700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 8532596-8533595 Gossypium raimondii
Gorai.001G080700 2.0kb upstream 2.0kb upstream 3482 true Chr01: 8533596-8537077 Gossypium raimondii
Gorai.001G080700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 8535078-8537077 Gossypium raimondii
Gorai.001G080700 2.0kb downstream 2.0kb downstream 3482 true Chr01: 8531596-8535077 Gossypium raimondii
Gorai.001G080700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 8531596-8533595 Gossypium raimondii
Gorai.001G080700 5.0kb upstream 5.0kb upstream 6482 true Chr01: 8533596-8540077 Gossypium raimondii
Gorai.001G080700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 8535078-8540077 Gossypium raimondii
Gorai.001G080700 5.0kb downstream 5.0kb downstream 6482 true Chr01: 8528596-8535077 Gossypium raimondii
Gorai.001G080700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 8528596-8533595 Gossypium raimondii
Gorai.001G080700 10.0kb upstream 10.0kb upstream 11482 true Chr01: 8533596-8545077 Gossypium raimondii
Gorai.001G080700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 8535078-8545077 Gossypium raimondii
Gorai.001G080700 10.0kb downstream 10.0kb downstream 11482 true Chr01: 8523596-8535077 Gossypium raimondii
Gorai.001G080700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 8523596-8533595 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123804694 5264 Brassicales-Malvales Singleton cluster - no MSA
124352140 5266 SBM View MSA
124253031 5268 Malvidae View MSA
124071819 5270 Rosid View MSA
123753365 5271 Pentapetalae View MSA
122794689 5272 Eudicot View MSA
122049990 5273 Angiosperm View MSA
121346874 5274 Embryophyte View MSA
123423954 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain