Gene : Gorai.001G101200 G. raimondii v2.1
Defline:  (1 of 2) PTHR34803:SF2 - PHOTOSYSTEM I REACTION CENTER SUBUNIT XI, CHLOROPLASTIC Genomic Order:  1012
Name:  ? Gorai.001G101200 Secondary Identifier:  ? PAC:26820919
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PHOTOALL-PWY Gossypium raimondii pathologic  
Graimondii PWY-101 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.001G101200 0.5kb upstream 0.5kb upstream 1662 true Chr01: 11323221-11324882 Gossypium raimondii
Gorai.001G101200 0.5kb upstream 0.5kb upstream 500 false Chr01: 11323221-11323720 Gossypium raimondii
Gorai.001G101200 0.5kb downstream 0.5kb downstream 1662 true Chr01: 11323721-11325382 Gossypium raimondii
Gorai.001G101200 0.5kb downstream 0.5kb downstream 500 false Chr01: 11324883-11325382 Gossypium raimondii
Gorai.001G101200 1.0kb upstream 1.0kb upstream 2162 true Chr01: 11322721-11324882 Gossypium raimondii
Gorai.001G101200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 11322721-11323720 Gossypium raimondii
Gorai.001G101200 1.0kb downstream 1.0kb downstream 2162 true Chr01: 11323721-11325882 Gossypium raimondii
Gorai.001G101200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 11324883-11325882 Gossypium raimondii
Gorai.001G101200 2.0kb upstream 2.0kb upstream 3162 true Chr01: 11321721-11324882 Gossypium raimondii
Gorai.001G101200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 11321721-11323720 Gossypium raimondii
Gorai.001G101200 2.0kb downstream 2.0kb downstream 3162 true Chr01: 11323721-11326882 Gossypium raimondii
Gorai.001G101200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 11324883-11326882 Gossypium raimondii
Gorai.001G101200 5.0kb upstream 5.0kb upstream 6162 true Chr01: 11318721-11324882 Gossypium raimondii
Gorai.001G101200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 11318721-11323720 Gossypium raimondii
Gorai.001G101200 5.0kb downstream 5.0kb downstream 6162 true Chr01: 11323721-11329882 Gossypium raimondii
Gorai.001G101200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 11324883-11329882 Gossypium raimondii
Gorai.001G101200 10.0kb upstream 10.0kb upstream 11162 true Chr01: 11313721-11324882 Gossypium raimondii
Gorai.001G101200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 11313721-11323720 Gossypium raimondii
Gorai.001G101200 10.0kb downstream 10.0kb downstream 11162 true Chr01: 11323721-11334882 Gossypium raimondii
Gorai.001G101200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 11324883-11334882 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040995 5273 Angiosperm View MSA
123838077 5264 Brassicales-Malvales View MSA
124343130 5266 SBM View MSA
124243038 5268 Malvidae View MSA
124061167 5270 Rosid View MSA
123750401 5271 Pentapetalae View MSA
122793402 5272 Eudicot View MSA
121343870 5274 Embryophyte View MSA
123424325 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain