Gene : Gorai.001G218100 G. raimondii v2.1
Defline:  (1 of 1) PTHR30372 - LIPID-A-DISACCHARIDE SYNTHASE Genomic Order:  2181
Name:  ? Gorai.001G218100 Secondary Identifier:  ? PAC:26821729
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii NAGLIPASYN-PWY Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.001G218100 0.5kb upstream 0.5kb upstream 4799 true Chr01: 43954185-43958983 Gossypium raimondii
Gorai.001G218100 0.5kb upstream 0.5kb upstream 500 false Chr01: 43954185-43954684 Gossypium raimondii
Gorai.001G218100 0.5kb downstream 0.5kb downstream 4799 true Chr01: 43954685-43959483 Gossypium raimondii
Gorai.001G218100 0.5kb downstream 0.5kb downstream 500 false Chr01: 43958984-43959483 Gossypium raimondii
Gorai.001G218100 1.0kb upstream 1.0kb upstream 5299 true Chr01: 43953685-43958983 Gossypium raimondii
Gorai.001G218100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 43953685-43954684 Gossypium raimondii
Gorai.001G218100 1.0kb downstream 1.0kb downstream 5299 true Chr01: 43954685-43959983 Gossypium raimondii
Gorai.001G218100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 43958984-43959983 Gossypium raimondii
Gorai.001G218100 2.0kb upstream 2.0kb upstream 6299 true Chr01: 43952685-43958983 Gossypium raimondii
Gorai.001G218100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 43952685-43954684 Gossypium raimondii
Gorai.001G218100 2.0kb downstream 2.0kb downstream 6299 true Chr01: 43954685-43960983 Gossypium raimondii
Gorai.001G218100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 43958984-43960983 Gossypium raimondii
Gorai.001G218100 5.0kb upstream 5.0kb upstream 9299 true Chr01: 43949685-43958983 Gossypium raimondii
Gorai.001G218100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 43949685-43954684 Gossypium raimondii
Gorai.001G218100 5.0kb downstream 5.0kb downstream 9299 true Chr01: 43954685-43963983 Gossypium raimondii
Gorai.001G218100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 43958984-43963983 Gossypium raimondii
Gorai.001G218100 10.0kb upstream 10.0kb upstream 14299 true Chr01: 43944685-43958983 Gossypium raimondii
Gorai.001G218100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 43944685-43954684 Gossypium raimondii
Gorai.001G218100 10.0kb downstream 10.0kb downstream 14299 true Chr01: 43954685-43968983 Gossypium raimondii
Gorai.001G218100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 43958984-43968983 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832263 5264 Brassicales-Malvales View MSA
124341423 5266 SBM View MSA
124243091 5268 Malvidae View MSA
124067392 5270 Rosid View MSA
123747166 5271 Pentapetalae View MSA
122791278 5272 Eudicot View MSA
122042549 5273 Angiosperm View MSA
121345953 5274 Embryophyte View MSA
123380297 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain