Gene : Gorai.001G219800 G. raimondii v2.1
Defline:  (1 of 37) PF14223 - gag-polypeptide of LTR copia-type (UBN2) Genomic Order:  2198
Name:  ? Gorai.001G219800 Secondary Identifier:  ? PAC:26821497
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.001G219800 0.5kb upstream 0.5kb upstream 1225 true Chr01: 44574003-44575227 Gossypium raimondii
Gorai.001G219800 0.5kb upstream 0.5kb upstream 500 false Chr01: 44574728-44575227 Gossypium raimondii
Gorai.001G219800 0.5kb downstream 0.5kb downstream 1225 true Chr01: 44573503-44574727 Gossypium raimondii
Gorai.001G219800 0.5kb downstream 0.5kb downstream 500 false Chr01: 44573503-44574002 Gossypium raimondii
Gorai.001G219800 1.0kb upstream 1.0kb upstream 1725 true Chr01: 44574003-44575727 Gossypium raimondii
Gorai.001G219800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 44574728-44575727 Gossypium raimondii
Gorai.001G219800 1.0kb downstream 1.0kb downstream 1725 true Chr01: 44573003-44574727 Gossypium raimondii
Gorai.001G219800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 44573003-44574002 Gossypium raimondii
Gorai.001G219800 2.0kb upstream 2.0kb upstream 2725 true Chr01: 44574003-44576727 Gossypium raimondii
Gorai.001G219800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 44574728-44576727 Gossypium raimondii
Gorai.001G219800 2.0kb downstream 2.0kb downstream 2725 true Chr01: 44572003-44574727 Gossypium raimondii
Gorai.001G219800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 44572003-44574002 Gossypium raimondii
Gorai.001G219800 5.0kb upstream 5.0kb upstream 5725 true Chr01: 44574003-44579727 Gossypium raimondii
Gorai.001G219800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 44574728-44579727 Gossypium raimondii
Gorai.001G219800 5.0kb downstream 5.0kb downstream 5725 true Chr01: 44569003-44574727 Gossypium raimondii
Gorai.001G219800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 44569003-44574002 Gossypium raimondii
Gorai.001G219800 10.0kb upstream 10.0kb upstream 10725 true Chr01: 44574003-44584727 Gossypium raimondii
Gorai.001G219800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 44574728-44584727 Gossypium raimondii
Gorai.001G219800 10.0kb downstream 10.0kb downstream 10725 true Chr01: 44564003-44574727 Gossypium raimondii
Gorai.001G219800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 44564003-44574002 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839181 5264 Brassicales-Malvales View MSA
124322572 5266 SBM View MSA
124250343 5268 Malvidae View MSA
124074671 5270 Rosid View MSA
123753620 5271 Pentapetalae View MSA
122797847 5272 Eudicot View MSA
122051084 5273 Angiosperm View MSA
123429186 5275 Viridiplantae View MSA
121351752 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain