Gene : Gorai.001G227300 G. raimondii v2.1
Defline:  (1 of 1) PF00060//PF10613 - Ligand-gated ion channel (Lig_chan) // Ligated ion channel L-glutamate- and glycine-binding site (Lig_chan-Glu_bd) Genomic Order:  2273
Name:  ? Gorai.001G227300 Secondary Identifier:  ? PAC:26823536
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.001G227300 0.5kb upstream 0.5kb upstream 1964 true Chr01: 46331571-46333534 Gossypium raimondii
Gorai.001G227300 0.5kb upstream 0.5kb upstream 500 false Chr01: 46331571-46332070 Gossypium raimondii
Gorai.001G227300 0.5kb downstream 0.5kb downstream 1964 true Chr01: 46332071-46334034 Gossypium raimondii
Gorai.001G227300 0.5kb downstream 0.5kb downstream 500 false Chr01: 46333535-46334034 Gossypium raimondii
Gorai.001G227300 1.0kb upstream 1.0kb upstream 2464 true Chr01: 46331071-46333534 Gossypium raimondii
Gorai.001G227300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 46331071-46332070 Gossypium raimondii
Gorai.001G227300 1.0kb downstream 1.0kb downstream 2464 true Chr01: 46332071-46334534 Gossypium raimondii
Gorai.001G227300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 46333535-46334534 Gossypium raimondii
Gorai.001G227300 2.0kb upstream 2.0kb upstream 3464 true Chr01: 46330071-46333534 Gossypium raimondii
Gorai.001G227300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 46330071-46332070 Gossypium raimondii
Gorai.001G227300 2.0kb downstream 2.0kb downstream 3464 true Chr01: 46332071-46335534 Gossypium raimondii
Gorai.001G227300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 46333535-46335534 Gossypium raimondii
Gorai.001G227300 5.0kb upstream 5.0kb upstream 6464 true Chr01: 46327071-46333534 Gossypium raimondii
Gorai.001G227300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 46327071-46332070 Gossypium raimondii
Gorai.001G227300 5.0kb downstream 5.0kb downstream 6464 true Chr01: 46332071-46338534 Gossypium raimondii
Gorai.001G227300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 46333535-46338534 Gossypium raimondii
Gorai.001G227300 10.0kb upstream 10.0kb upstream 11464 true Chr01: 46322071-46333534 Gossypium raimondii
Gorai.001G227300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 46322071-46332070 Gossypium raimondii
Gorai.001G227300 10.0kb downstream 10.0kb downstream 11464 true Chr01: 46332071-46343534 Gossypium raimondii
Gorai.001G227300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 46333535-46343534 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123804477 5264 Brassicales-Malvales Singleton cluster - no MSA
124350839 5266 SBM View MSA
124254481 5268 Malvidae View MSA
124074334 5270 Rosid View MSA
123753015 5271 Pentapetalae View MSA
122797408 5272 Eudicot View MSA
122051662 5273 Angiosperm View MSA
121351346 5274 Embryophyte View MSA
123428796 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain