Gene : Gorai.002G118800 G. raimondii v2.1
Defline:  (1 of 2) PTHR23076:SF33 - ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 1, CHLOROPLASTIC-RELATED Genomic Order:  1188
Name:  ? Gorai.002G118800 Secondary Identifier:  ? PAC:26794178
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.002G118800 0.5kb upstream 0.5kb upstream 3782 true Chr02: 16909300-16913081 Gossypium raimondii
Gorai.002G118800 0.5kb upstream 0.5kb upstream 500 false Chr02: 16912582-16913081 Gossypium raimondii
Gorai.002G118800 0.5kb downstream 0.5kb downstream 3782 true Chr02: 16908800-16912581 Gossypium raimondii
Gorai.002G118800 0.5kb downstream 0.5kb downstream 500 false Chr02: 16908800-16909299 Gossypium raimondii
Gorai.002G118800 1.0kb upstream 1.0kb upstream 4282 true Chr02: 16909300-16913581 Gossypium raimondii
Gorai.002G118800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 16912582-16913581 Gossypium raimondii
Gorai.002G118800 1.0kb downstream 1.0kb downstream 4282 true Chr02: 16908300-16912581 Gossypium raimondii
Gorai.002G118800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 16908300-16909299 Gossypium raimondii
Gorai.002G118800 2.0kb upstream 2.0kb upstream 5282 true Chr02: 16909300-16914581 Gossypium raimondii
Gorai.002G118800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 16912582-16914581 Gossypium raimondii
Gorai.002G118800 2.0kb downstream 2.0kb downstream 5282 true Chr02: 16907300-16912581 Gossypium raimondii
Gorai.002G118800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 16907300-16909299 Gossypium raimondii
Gorai.002G118800 5.0kb upstream 5.0kb upstream 8282 true Chr02: 16909300-16917581 Gossypium raimondii
Gorai.002G118800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 16912582-16917581 Gossypium raimondii
Gorai.002G118800 5.0kb downstream 5.0kb downstream 8282 true Chr02: 16904300-16912581 Gossypium raimondii
Gorai.002G118800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 16904300-16909299 Gossypium raimondii
Gorai.002G118800 10.0kb upstream 10.0kb upstream 13282 true Chr02: 16909300-16922581 Gossypium raimondii
Gorai.002G118800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 16912582-16922581 Gossypium raimondii
Gorai.002G118800 10.0kb downstream 10.0kb downstream 13282 true Chr02: 16899300-16912581 Gossypium raimondii
Gorai.002G118800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 16899300-16909299 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838553 5264 Brassicales-Malvales View MSA
124337875 5266 SBM View MSA
124238414 5268 Malvidae View MSA
124060614 5270 Rosid View MSA
123737451 5271 Pentapetalae View MSA
122792150 5272 Eudicot View MSA
122046642 5273 Angiosperm View MSA
121346512 5274 Embryophyte View MSA
123425128 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain