Gene : Gorai.002G178800 G. raimondii v2.1
Defline:  (1 of 2) PTHR24326:SF114 - HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-17-RELATED Genomic Order:  1788
Name:  ? Gorai.002G178800 Secondary Identifier:  ? PAC:26796182
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.002G178800 0.5kb upstream 0.5kb upstream 3649 true Chr02: 46585967-46589615 Gossypium raimondii
Gorai.002G178800 0.5kb upstream 0.5kb upstream 500 false Chr02: 46585967-46586466 Gossypium raimondii
Gorai.002G178800 0.5kb downstream 0.5kb downstream 3649 true Chr02: 46586467-46590115 Gossypium raimondii
Gorai.002G178800 0.5kb downstream 0.5kb downstream 500 false Chr02: 46589616-46590115 Gossypium raimondii
Gorai.002G178800 1.0kb upstream 1.0kb upstream 4149 true Chr02: 46585467-46589615 Gossypium raimondii
Gorai.002G178800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 46585467-46586466 Gossypium raimondii
Gorai.002G178800 1.0kb downstream 1.0kb downstream 4149 true Chr02: 46586467-46590615 Gossypium raimondii
Gorai.002G178800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 46589616-46590615 Gossypium raimondii
Gorai.002G178800 2.0kb upstream 2.0kb upstream 5149 true Chr02: 46584467-46589615 Gossypium raimondii
Gorai.002G178800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 46584467-46586466 Gossypium raimondii
Gorai.002G178800 2.0kb downstream 2.0kb downstream 5149 true Chr02: 46586467-46591615 Gossypium raimondii
Gorai.002G178800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 46589616-46591615 Gossypium raimondii
Gorai.002G178800 5.0kb upstream 5.0kb upstream 8149 true Chr02: 46581467-46589615 Gossypium raimondii
Gorai.002G178800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 46581467-46586466 Gossypium raimondii
Gorai.002G178800 5.0kb downstream 5.0kb downstream 8149 true Chr02: 46586467-46594615 Gossypium raimondii
Gorai.002G178800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 46589616-46594615 Gossypium raimondii
Gorai.002G178800 10.0kb upstream 10.0kb upstream 13149 true Chr02: 46576467-46589615 Gossypium raimondii
Gorai.002G178800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 46576467-46586466 Gossypium raimondii
Gorai.002G178800 10.0kb downstream 10.0kb downstream 13149 true Chr02: 46586467-46599615 Gossypium raimondii
Gorai.002G178800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 46589616-46599615 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837643 5264 Brassicales-Malvales View MSA
124343201 5266 SBM View MSA
124248008 5268 Malvidae View MSA
124067760 5270 Rosid View MSA
123739318 5271 Pentapetalae View MSA
122797113 5272 Eudicot View MSA
122043928 5273 Angiosperm View MSA
121351534 5274 Embryophyte View MSA
123382211 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain