Gene : Gorai.002G227800 G. raimondii v2.1
Defline:  (1 of 1) PTHR21027 - TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN54 Genomic Order:  2278
Name:  ? Gorai.002G227800 Secondary Identifier:  ? PAC:26796101
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.002G227800 0.5kb upstream 0.5kb upstream 4061 true Chr02: 58635891-58639951 Gossypium raimondii
Gorai.002G227800 0.5kb upstream 0.5kb upstream 500 false Chr02: 58635891-58636390 Gossypium raimondii
Gorai.002G227800 0.5kb downstream 0.5kb downstream 4061 true Chr02: 58636391-58640451 Gossypium raimondii
Gorai.002G227800 0.5kb downstream 0.5kb downstream 500 false Chr02: 58639952-58640451 Gossypium raimondii
Gorai.002G227800 1.0kb upstream 1.0kb upstream 4561 true Chr02: 58635391-58639951 Gossypium raimondii
Gorai.002G227800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 58635391-58636390 Gossypium raimondii
Gorai.002G227800 1.0kb downstream 1.0kb downstream 4561 true Chr02: 58636391-58640951 Gossypium raimondii
Gorai.002G227800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 58639952-58640951 Gossypium raimondii
Gorai.002G227800 2.0kb upstream 2.0kb upstream 5561 true Chr02: 58634391-58639951 Gossypium raimondii
Gorai.002G227800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 58634391-58636390 Gossypium raimondii
Gorai.002G227800 2.0kb downstream 2.0kb downstream 5561 true Chr02: 58636391-58641951 Gossypium raimondii
Gorai.002G227800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 58639952-58641951 Gossypium raimondii
Gorai.002G227800 5.0kb upstream 5.0kb upstream 8561 true Chr02: 58631391-58639951 Gossypium raimondii
Gorai.002G227800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 58631391-58636390 Gossypium raimondii
Gorai.002G227800 5.0kb downstream 5.0kb downstream 8561 true Chr02: 58636391-58644951 Gossypium raimondii
Gorai.002G227800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 58639952-58644951 Gossypium raimondii
Gorai.002G227800 10.0kb upstream 10.0kb upstream 13561 true Chr02: 58626391-58639951 Gossypium raimondii
Gorai.002G227800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 58626391-58636390 Gossypium raimondii
Gorai.002G227800 10.0kb downstream 10.0kb downstream 13561 true Chr02: 58636391-58649951 Gossypium raimondii
Gorai.002G227800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 58639952-58649951 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123805302 5264 Brassicales-Malvales Singleton cluster - no MSA
124351445 5266 SBM View MSA
124243740 5268 Malvidae View MSA
124066915 5270 Rosid View MSA
123737661 5271 Pentapetalae View MSA
122790630 5272 Eudicot View MSA
122051332 5273 Angiosperm View MSA
121351548 5274 Embryophyte View MSA
123382220 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain