Gene : Gorai.003G026800 G. raimondii v2.1
Defline:  (1 of 4) PTHR10896:SF17 - BETA-1,4-XYLOSYLTRANSFERASE IRX14-RELATED Genomic Order:  268
Name:  ? Gorai.003G026800 Secondary Identifier:  ? PAC:26797085
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-5800 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.003G026800 0.5kb upstream 0.5kb upstream 3491 true Chr03: 2429944-2433434 Gossypium raimondii
Gorai.003G026800 0.5kb upstream 0.5kb upstream 500 false Chr03: 2429944-2430443 Gossypium raimondii
Gorai.003G026800 0.5kb downstream 0.5kb downstream 3491 true Chr03: 2430444-2433934 Gossypium raimondii
Gorai.003G026800 0.5kb downstream 0.5kb downstream 500 false Chr03: 2433435-2433934 Gossypium raimondii
Gorai.003G026800 1.0kb upstream 1.0kb upstream 3991 true Chr03: 2429444-2433434 Gossypium raimondii
Gorai.003G026800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 2429444-2430443 Gossypium raimondii
Gorai.003G026800 1.0kb downstream 1.0kb downstream 3991 true Chr03: 2430444-2434434 Gossypium raimondii
Gorai.003G026800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 2433435-2434434 Gossypium raimondii
Gorai.003G026800 2.0kb upstream 2.0kb upstream 4991 true Chr03: 2428444-2433434 Gossypium raimondii
Gorai.003G026800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 2428444-2430443 Gossypium raimondii
Gorai.003G026800 2.0kb downstream 2.0kb downstream 4991 true Chr03: 2430444-2435434 Gossypium raimondii
Gorai.003G026800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 2433435-2435434 Gossypium raimondii
Gorai.003G026800 5.0kb upstream 5.0kb upstream 7991 true Chr03: 2425444-2433434 Gossypium raimondii
Gorai.003G026800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 2425444-2430443 Gossypium raimondii
Gorai.003G026800 5.0kb downstream 5.0kb downstream 7991 true Chr03: 2430444-2438434 Gossypium raimondii
Gorai.003G026800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 2433435-2438434 Gossypium raimondii
Gorai.003G026800 10.0kb upstream 10.0kb upstream 12991 true Chr03: 2420444-2433434 Gossypium raimondii
Gorai.003G026800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 2420444-2430443 Gossypium raimondii
Gorai.003G026800 10.0kb downstream 10.0kb downstream 12991 true Chr03: 2430444-2443434 Gossypium raimondii
Gorai.003G026800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 2433435-2443434 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121513421 5273 Angiosperm Singleton cluster - no MSA
123805449 5264 Brassicales-Malvales Singleton cluster - no MSA
124302420 5266 SBM Singleton cluster - no MSA
124153251 5268 Malvidae Singleton cluster - no MSA
123878397 5270 Rosid Singleton cluster - no MSA
123461803 5271 Pentapetalae Singleton cluster - no MSA
122497149 5272 Eudicot Singleton cluster - no MSA
121350855 5274 Embryophyte View MSA
123381907 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain