Gene : Gorai.003G036400 G. raimondii v2.1
Defline:  (1 of 10) 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B Genomic Order:  364
Name:  ? Gorai.003G036400 Secondary Identifier:  ? PAC:26799159
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.003G036400 0.5kb upstream 0.5kb upstream 5178 true Chr03: 3773453-3778630 Gossypium raimondii
Gorai.003G036400 0.5kb upstream 0.5kb upstream 500 false Chr03: 3773453-3773952 Gossypium raimondii
Gorai.003G036400 0.5kb downstream 0.5kb downstream 5178 true Chr03: 3773953-3779130 Gossypium raimondii
Gorai.003G036400 0.5kb downstream 0.5kb downstream 500 false Chr03: 3778631-3779130 Gossypium raimondii
Gorai.003G036400 1.0kb upstream 1.0kb upstream 5678 true Chr03: 3772953-3778630 Gossypium raimondii
Gorai.003G036400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 3772953-3773952 Gossypium raimondii
Gorai.003G036400 1.0kb downstream 1.0kb downstream 5678 true Chr03: 3773953-3779630 Gossypium raimondii
Gorai.003G036400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 3778631-3779630 Gossypium raimondii
Gorai.003G036400 2.0kb upstream 2.0kb upstream 6678 true Chr03: 3771953-3778630 Gossypium raimondii
Gorai.003G036400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 3771953-3773952 Gossypium raimondii
Gorai.003G036400 2.0kb downstream 2.0kb downstream 6678 true Chr03: 3773953-3780630 Gossypium raimondii
Gorai.003G036400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 3778631-3780630 Gossypium raimondii
Gorai.003G036400 5.0kb upstream 5.0kb upstream 9678 true Chr03: 3768953-3778630 Gossypium raimondii
Gorai.003G036400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 3768953-3773952 Gossypium raimondii
Gorai.003G036400 5.0kb downstream 5.0kb downstream 9678 true Chr03: 3773953-3783630 Gossypium raimondii
Gorai.003G036400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 3778631-3783630 Gossypium raimondii
Gorai.003G036400 10.0kb upstream 10.0kb upstream 14678 true Chr03: 3763953-3778630 Gossypium raimondii
Gorai.003G036400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 3763953-3773952 Gossypium raimondii
Gorai.003G036400 10.0kb downstream 10.0kb downstream 14678 true Chr03: 3773953-3788630 Gossypium raimondii
Gorai.003G036400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 3778631-3788630 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792559 5273 Angiosperm View MSA
123832044 5264 Brassicales-Malvales View MSA
124341031 5266 SBM View MSA
124240495 5268 Malvidae View MSA
124050434 5270 Rosid View MSA
123741525 5271 Pentapetalae View MSA
122798138 5272 Eudicot View MSA
121063781 5274 Embryophyte View MSA
123103506 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain