Protein Family : Rhamnogalacturonate lyase family protein 124240495

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  31

31 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
28333.t000034 (1 of 8) 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B R. communis v0.1 3527   28333: 317395-320921
28333.t000018 (1 of 8) 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B R. communis v0.1 6257   28333: 159534-165790
orange1.1g006741m.g (1 of 9) 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B C. sinensis v1.1 5601   scaffold01219: 5122-10722
AT2G22620 (1 of 7) K18195 - rhamnogalacturonan endolyase (RGL4, rhiE) A. thaliana TAIR10 5824   Chr2: 9604772-9610595
Thhalv10000697m.g (1 of 7) 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B E. salsugineum v1.0 4078   scaffold_15: 1125706-1129783
Ciclev10025074m.g (1 of 10) 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B C. clementina v1.0 5951   scaffold_7: 4965341-4971291
Lus10004281.g (1 of 17) 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B L. usitatissimum v1.0 5138   scaffold1884: 54188-59325
Lus10039627.g (1 of 17) 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B L. usitatissimum v1.0 5042   scaffold15: 831116-836157
Lus10019231.g (1 of 17) 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B L. usitatissimum v1.0 3389   scaffold377: 75599-78987
Lus10029552.g (1 of 17) 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B L. usitatissimum v1.0 2693   scaffold55: 1070313-1073005
Gorai.003G036600 (1 of 10) 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B G. raimondii v2.1 4751   Chr03: 3813256-3818006
Gorai.003G036400 (1 of 10) 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B G. raimondii v2.1 4678   Chr03: 3773953-3778630
Gorai.008G089300 (1 of 10) 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B G. raimondii v2.1 5220   Chr08: 20565115-20570334
Gorai.007G231600 (1 of 10) 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B G. raimondii v2.1 5507   Chr07: 29136546-29142052
Thecc1EG000945 (1 of 5) 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B T. cacao v1.1 5555   scaffold_1: 4322399-4327953
Araha.7500s0003 (1 of 8) 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B A. halleri v1.1 4015   Scaffold7500: 13334-17348
Cagra.1080s0004 (1 of 8) 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B C. grandiflora v1.1 5078   Scaffold1080: 22493-27570
Brara.I04573 (1 of 10) 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B B. rapa FPsc v1.3 6824   A09: 39536392-39543215
Bostr.19427s0032 (1 of 7) 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B B. stricta v1.2 6576   Scaffold19427: 233509-240084
SapurV1A.0048s0410 (1 of 9) 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B S. purpurea v1.0 6599   chr13: 17823470-17830068
SapurV1A.0235s0080 (1 of 7) K18195 - rhamnogalacturonan endolyase (RGL4, rhiE) S. purpurea v1.0 5783   chr14: 231266-237048
SapurV1A.0057s0260 (1 of 7) K18195 - rhamnogalacturonan endolyase (RGL4, rhiE) S. purpurea v1.0 5608   chr06: 21284197-21289804
Manes.12G122300 (1 of 11) 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B M. esculenta v6.1 3443   Chromosome12: 27598898-27602340
Manes.12G122700 (1 of 10) PF06045 - Rhamnogalacturonate lyase family M. esculenta v6.1 5153   Chromosome12: 27667176-27672328
Manes.13G102800 (1 of 11) 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B M. esculenta v6.1 4635   Chromosome13: 22424854-22429488
AL4G12160 (1 of 7) 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B A. lyrata v2.1 6160   scaffold_4: 1067384-1073543
Potri.006G218500 (1 of 8) K18195 - rhamnogalacturonan endolyase (RGL4, rhiE) P. trichocarpa v3.1 5687   Chr06: 23094566-23100252
Potri.014G004500 (1 of 8) K18195 - rhamnogalacturonan endolyase (RGL4, rhiE) P. trichocarpa v3.1 6338   Chr14: 514421-520758
Podel.14G007700 (1 of 8) 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B P. deltoides WV94 v2.1 6328   Chr14: 588493-594820
Podel.06G230800 (1 of 8) 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B P. deltoides WV94 v2.1 5359   Chr06: 23634660-23640018

31 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
orange1.1g006741m C. sinensis v1.1 124240495 Rhamnogalacturonate lyase family protein 1 5268 Malvidae
Thhalv10000697m E. salsugineum v1.0 124240495 Rhamnogalacturonate lyase family protein 1 5268 Malvidae
Ciclev10025074m C. clementina v1.0 124240495 Rhamnogalacturonate lyase family protein 1 5268 Malvidae
Lus10019231 L. usitatissimum v1.0 124240495 Rhamnogalacturonate lyase family protein 4 5268 Malvidae
Araha.7500s0003.1.p A. halleri v1.1 124240495 Rhamnogalacturonate lyase family protein 1 5268 Malvidae
SapurV1A.0048s0410.1.p S. purpurea v1.0 124240495 Rhamnogalacturonate lyase family protein 3 5268 Malvidae
Manes.13G102800.1.p M. esculenta v6.1 124240495 Rhamnogalacturonate lyase family protein 3 5268 Malvidae
Manes.12G122300.1.p M. esculenta v6.1 124240495 Rhamnogalacturonate lyase family protein 3 5268 Malvidae
AL4G12160.t1 A. lyrata v2.1 124240495 Rhamnogalacturonate lyase family protein 1 5268 Malvidae
Potri.014G004500.1.p P. trichocarpa v3.1 124240495 Rhamnogalacturonate lyase family protein 2 5268 Malvidae
Podel.06G230800.1.p P. deltoides WV94 v2.1 124240495 Rhamnogalacturonate lyase family protein 2 5268 Malvidae
28333.m000588 R. communis v0.1 124240495 Rhamnogalacturonate lyase family protein 2 5268 Malvidae
28333.m000572 R. communis v0.1 124240495 Rhamnogalacturonate lyase family protein 2 5268 Malvidae
AT2G22620.1 A. thaliana TAIR10 124240495 Rhamnogalacturonate lyase family protein 1 5268 Malvidae
Lus10004281 L. usitatissimum v1.0 124240495 Rhamnogalacturonate lyase family protein 4 5268 Malvidae
Lus10039627 L. usitatissimum v1.0 124240495 Rhamnogalacturonate lyase family protein 4 5268 Malvidae
Lus10029552 L. usitatissimum v1.0 124240495 Rhamnogalacturonate lyase family protein 4 5268 Malvidae
Gorai.008G089300.1 G. raimondii v2.1 124240495 Rhamnogalacturonate lyase family protein 4 5268 Malvidae
Gorai.007G231600.1 G. raimondii v2.1 124240495 Rhamnogalacturonate lyase family protein 4 5268 Malvidae
Gorai.003G036400.1 G. raimondii v2.1 124240495 Rhamnogalacturonate lyase family protein 4 5268 Malvidae
Gorai.003G036600.1 G. raimondii v2.1 124240495 Rhamnogalacturonate lyase family protein 4 5268 Malvidae
Thecc1EG000945t1 T. cacao v1.1 124240495 Rhamnogalacturonate lyase family protein 1 5268 Malvidae
Cagra.1080s0004.1.p C. grandiflora v1.1 124240495 Rhamnogalacturonate lyase family protein 1 5268 Malvidae
Brara.I04573.1.p B. rapa FPsc v1.3 124240495 Rhamnogalacturonate lyase family protein 1 5268 Malvidae
Bostr.19427s0032.1.p B. stricta v1.2 124240495 Rhamnogalacturonate lyase family protein 1 5268 Malvidae
SapurV1A.0057s0260.1.p S. purpurea v1.0 124240495 Rhamnogalacturonate lyase family protein 3 5268 Malvidae
SapurV1A.0235s0080.1.p S. purpurea v1.0 124240495 Rhamnogalacturonate lyase family protein 3 5268 Malvidae
Manes.12G122700.1.p M. esculenta v6.1 124240495 Rhamnogalacturonate lyase family protein 3 5268 Malvidae
Potri.006G218500.1.p P. trichocarpa v3.1 124240495 Rhamnogalacturonate lyase family protein 2 5268 Malvidae
Podel.14G007700.1.p P. deltoides WV94 v2.1 124240495 Rhamnogalacturonate lyase family protein 2 5268 Malvidae