Gene : Thecc1EG000945 T. cacao v1.1
Defline:  (1 of 5) 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B Genomic Order:  833
Name:  ? Thecc1EG000945 Secondary Identifier:  ? PAC:27434703
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000945 0.5kb upstream 0.5kb upstream 6055 true scaffold_1: 4321899-4327953 Theobroma cacao
Thecc1EG000945 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 4321899-4322398 Theobroma cacao
Thecc1EG000945 0.5kb downstream 0.5kb downstream 6055 true scaffold_1: 4322399-4328453 Theobroma cacao
Thecc1EG000945 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 4327954-4328453 Theobroma cacao
Thecc1EG000945 1.0kb upstream 1.0kb upstream 6555 true scaffold_1: 4321399-4327953 Theobroma cacao
Thecc1EG000945 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 4321399-4322398 Theobroma cacao
Thecc1EG000945 1.0kb downstream 1.0kb downstream 6555 true scaffold_1: 4322399-4328953 Theobroma cacao
Thecc1EG000945 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 4327954-4328953 Theobroma cacao
Thecc1EG000945 2.0kb upstream 2.0kb upstream 7555 true scaffold_1: 4320399-4327953 Theobroma cacao
Thecc1EG000945 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 4320399-4322398 Theobroma cacao
Thecc1EG000945 2.0kb downstream 2.0kb downstream 7555 true scaffold_1: 4322399-4329953 Theobroma cacao
Thecc1EG000945 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 4327954-4329953 Theobroma cacao
Thecc1EG000945 5.0kb upstream 5.0kb upstream 10555 true scaffold_1: 4317399-4327953 Theobroma cacao
Thecc1EG000945 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 4317399-4322398 Theobroma cacao
Thecc1EG000945 5.0kb downstream 5.0kb downstream 10555 true scaffold_1: 4322399-4332953 Theobroma cacao
Thecc1EG000945 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 4327954-4332953 Theobroma cacao
Thecc1EG000945 10.0kb upstream 10.0kb upstream 15555 true scaffold_1: 4312399-4327953 Theobroma cacao
Thecc1EG000945 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 4312399-4322398 Theobroma cacao
Thecc1EG000945 10.0kb downstream 10.0kb downstream 15555 true scaffold_1: 4322399-4337953 Theobroma cacao
Thecc1EG000945 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 4327954-4337953 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792559 5273 Angiosperm View MSA
123832044 5264 Brassicales-Malvales View MSA
124341031 5266 SBM View MSA
124240495 5268 Malvidae View MSA
124050434 5270 Rosid View MSA
123741525 5271 Pentapetalae View MSA
122798138 5272 Eudicot View MSA
121063781 5274 Embryophyte View MSA
123103506 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain