Gene : Gorai.003G146000 G. raimondii v2.1
Defline:  (1 of 1) PTHR10459:SF10 - DNA LIGASE 1 Genomic Order:  1460
Name:  ? Gorai.003G146000 Secondary Identifier:  ? PAC:26799939
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.003G146000 0.5kb upstream 0.5kb upstream 10386 true Chr03: 41261428-41271813 Gossypium raimondii
Gorai.003G146000 0.5kb upstream 0.5kb upstream 500 false Chr03: 41271314-41271813 Gossypium raimondii
Gorai.003G146000 0.5kb downstream 0.5kb downstream 10386 true Chr03: 41260928-41271313 Gossypium raimondii
Gorai.003G146000 0.5kb downstream 0.5kb downstream 500 false Chr03: 41260928-41261427 Gossypium raimondii
Gorai.003G146000 1.0kb upstream 1.0kb upstream 10886 true Chr03: 41261428-41272313 Gossypium raimondii
Gorai.003G146000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 41271314-41272313 Gossypium raimondii
Gorai.003G146000 1.0kb downstream 1.0kb downstream 10886 true Chr03: 41260428-41271313 Gossypium raimondii
Gorai.003G146000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 41260428-41261427 Gossypium raimondii
Gorai.003G146000 2.0kb upstream 2.0kb upstream 11886 true Chr03: 41261428-41273313 Gossypium raimondii
Gorai.003G146000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 41271314-41273313 Gossypium raimondii
Gorai.003G146000 2.0kb downstream 2.0kb downstream 11886 true Chr03: 41259428-41271313 Gossypium raimondii
Gorai.003G146000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 41259428-41261427 Gossypium raimondii
Gorai.003G146000 5.0kb upstream 5.0kb upstream 14886 true Chr03: 41261428-41276313 Gossypium raimondii
Gorai.003G146000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 41271314-41276313 Gossypium raimondii
Gorai.003G146000 5.0kb downstream 5.0kb downstream 14886 true Chr03: 41256428-41271313 Gossypium raimondii
Gorai.003G146000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 41256428-41261427 Gossypium raimondii
Gorai.003G146000 10.0kb upstream 10.0kb upstream 19886 true Chr03: 41261428-41281313 Gossypium raimondii
Gorai.003G146000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 41271314-41281313 Gossypium raimondii
Gorai.003G146000 10.0kb downstream 10.0kb downstream 19886 true Chr03: 41251428-41271313 Gossypium raimondii
Gorai.003G146000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 41251428-41261427 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828788 5264 Brassicales-Malvales View MSA
124343600 5266 SBM View MSA
124239190 5268 Malvidae View MSA
124060401 5270 Rosid View MSA
123746296 5271 Pentapetalae View MSA
122793355 5272 Eudicot View MSA
122047557 5273 Angiosperm View MSA
121348285 5274 Embryophyte View MSA
123426430 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain