Gene : Gorai.003G148300 G. raimondii v2.1
Defline:  (1 of 5) PF00077 - Retroviral aspartyl protease (RVP) Genomic Order:  1483
Name:  ? Gorai.003G148300 Secondary Identifier:  ? PAC:26798058
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.003G148300 0.5kb upstream 0.5kb upstream 4447 true Chr03: 41579821-41584267 Gossypium raimondii
Gorai.003G148300 0.5kb upstream 0.5kb upstream 500 false Chr03: 41579821-41580320 Gossypium raimondii
Gorai.003G148300 0.5kb downstream 0.5kb downstream 4447 true Chr03: 41580321-41584767 Gossypium raimondii
Gorai.003G148300 0.5kb downstream 0.5kb downstream 500 false Chr03: 41584268-41584767 Gossypium raimondii
Gorai.003G148300 1.0kb upstream 1.0kb upstream 4947 true Chr03: 41579321-41584267 Gossypium raimondii
Gorai.003G148300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 41579321-41580320 Gossypium raimondii
Gorai.003G148300 1.0kb downstream 1.0kb downstream 4947 true Chr03: 41580321-41585267 Gossypium raimondii
Gorai.003G148300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 41584268-41585267 Gossypium raimondii
Gorai.003G148300 2.0kb upstream 2.0kb upstream 5947 true Chr03: 41578321-41584267 Gossypium raimondii
Gorai.003G148300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 41578321-41580320 Gossypium raimondii
Gorai.003G148300 2.0kb downstream 2.0kb downstream 5947 true Chr03: 41580321-41586267 Gossypium raimondii
Gorai.003G148300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 41584268-41586267 Gossypium raimondii
Gorai.003G148300 5.0kb upstream 5.0kb upstream 8947 true Chr03: 41575321-41584267 Gossypium raimondii
Gorai.003G148300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 41575321-41580320 Gossypium raimondii
Gorai.003G148300 5.0kb downstream 5.0kb downstream 8947 true Chr03: 41580321-41589267 Gossypium raimondii
Gorai.003G148300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 41584268-41589267 Gossypium raimondii
Gorai.003G148300 10.0kb upstream 10.0kb upstream 13947 true Chr03: 41570321-41584267 Gossypium raimondii
Gorai.003G148300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 41570321-41580320 Gossypium raimondii
Gorai.003G148300 10.0kb downstream 10.0kb downstream 13947 true Chr03: 41580321-41594267 Gossypium raimondii
Gorai.003G148300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 41584268-41594267 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028362 5273 Angiosperm View MSA
123839047 5264 Brassicales-Malvales View MSA
124322542 5266 SBM View MSA
124251734 5268 Malvidae View MSA
124040401 5270 Rosid View MSA
123751157 5271 Pentapetalae View MSA
122773930 5272 Eudicot View MSA
121297863 5274 Embryophyte View MSA
123335877 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain