Protein Family : PF00077//PF00098 - Retroviral aspartyl protease (RVP) // Zinc knuckle (zf-CCHC) 123839047

Method ID:  5264 Method Name:  Brassicales-Malvales
Sequence Alignment:  View MSA Member Count:  21

21 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
Thhalv10023038m.g (1 of 16) PF01107 - Viral movement protein (MP) (MP) E. salsugineum v1.0 4632   scaffold_11: 1459350-1463981
Thhalv10028167m.g (1 of 16) PF01107 - Viral movement protein (MP) (MP) E. salsugineum v1.0 4457   scaffold_14: 8848885-8853341
Thhalv10012334m.g (1 of 56) PF00098 - Zinc knuckle E. salsugineum v1.0 2485   scaffold_7: 5919759-5922243
Thhalv10024098m.g (1 of 56) PF00098 - Zinc knuckle E. salsugineum v1.0 2194   scaffold_8: 4580396-4582589
Gorai.001G115800 (1 of 4) PF01107 - Viral movement protein (MP) (MP) G. raimondii v2.1 6683   Chr01: 13762821-13769503
Gorai.003G148300 (1 of 5) PF00077 - Retroviral aspartyl protease (RVP) G. raimondii v2.1 3947   Chr03: 41580321-41584267
Gorai.003G148400 (1 of 2) PF00077//PF00098 - Retroviral aspartyl protease (RVP) // Zinc knuckle (zf-CCHC) G. raimondii v2.1 3314   Chr03: 41588534-41591847
Gorai.003G159900 (1 of 4) PF01107 - Viral movement protein (MP) (MP) G. raimondii v2.1 2286   Chr03: 42896137-42898422
Gorai.004G224200   G. raimondii v2.1 5722   Chr04: 55856070-55861791
Gorai.012G096500   G. raimondii v2.1 7548   Chr12: 19330511-19338058
Gorai.013G130000   G. raimondii v2.1 5362   Chr13: 34030112-34035473
Gorai.005G169400 (1 of 1) PF00098//PF01107 - Zinc knuckle (zf-CCHC) // Viral movement protein (MP) (MP) G. raimondii v2.1 2821   Chr05: 49642612-49645432
Gorai.008G169100   G. raimondii v2.1 2543   Chr08: 44202902-44205444
Gorai.010G104800   G. raimondii v2.1 4021   Chr10: 19120127-19124147
Gorai.010G125800 (1 of 4) PF01107 - Viral movement protein (MP) (MP) G. raimondii v2.1 6435   Chr10: 26379281-26385715
Gorai.010G157800   G. raimondii v2.1 3223   Chr10: 44367362-44370584
Gorai.006G078200 (1 of 5) PF00077 - Retroviral aspartyl protease (RVP) G. raimondii v2.1 3704   Chr06: 30293814-30297517
Gorai.011G123900   G. raimondii v2.1 4812   Chr11: 17444814-17449625
Gorai.011G206800   G. raimondii v2.1 3851   Chr11: 49824318-49828168
Brara.F01990 (1 of 2) PF01107 - Viral movement protein (MP) (MP) B. rapa FPsc v1.3 2860   A06: 15550815-15553674
Brara.H00626 (1 of 2) PF01107 - Viral movement protein (MP) (MP) B. rapa FPsc v1.3 3374   A08: 8107443-8110816

21 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Thhalv10023038m E. salsugineum v1.0 123839047 PF00077//PF00098 - Retroviral aspartyl protease (RVP) // Zinc knuckle (zf-CCHC) 4 5264 Brassicales-Malvales
Gorai.010G104800.1 G. raimondii v2.1 123839047 PF00077//PF00098 - Retroviral aspartyl protease (RVP) // Zinc knuckle (zf-CCHC) 15 5264 Brassicales-Malvales
Gorai.008G169100.1 G. raimondii v2.1 123839047 PF00077//PF00098 - Retroviral aspartyl protease (RVP) // Zinc knuckle (zf-CCHC) 15 5264 Brassicales-Malvales
Brara.H00626.1.p B. rapa FPsc v1.3 123839047 PF00077//PF00098 - Retroviral aspartyl protease (RVP) // Zinc knuckle (zf-CCHC) 2 5264 Brassicales-Malvales
Thhalv10028167m E. salsugineum v1.0 123839047 PF00077//PF00098 - Retroviral aspartyl protease (RVP) // Zinc knuckle (zf-CCHC) 4 5264 Brassicales-Malvales
Thhalv10012334m E. salsugineum v1.0 123839047 PF00077//PF00098 - Retroviral aspartyl protease (RVP) // Zinc knuckle (zf-CCHC) 4 5264 Brassicales-Malvales
Thhalv10024098m E. salsugineum v1.0 123839047 PF00077//PF00098 - Retroviral aspartyl protease (RVP) // Zinc knuckle (zf-CCHC) 4 5264 Brassicales-Malvales
Gorai.012G096500.1 G. raimondii v2.1 123839047 PF00077//PF00098 - Retroviral aspartyl protease (RVP) // Zinc knuckle (zf-CCHC) 15 5264 Brassicales-Malvales
Gorai.006G078200.1 G. raimondii v2.1 123839047 PF00077//PF00098 - Retroviral aspartyl protease (RVP) // Zinc knuckle (zf-CCHC) 15 5264 Brassicales-Malvales
Gorai.005G169400.1 G. raimondii v2.1 123839047 PF00077//PF00098 - Retroviral aspartyl protease (RVP) // Zinc knuckle (zf-CCHC) 15 5264 Brassicales-Malvales
Gorai.003G148400.1 G. raimondii v2.1 123839047 PF00077//PF00098 - Retroviral aspartyl protease (RVP) // Zinc knuckle (zf-CCHC) 15 5264 Brassicales-Malvales
Gorai.003G159900.1 G. raimondii v2.1 123839047 PF00077//PF00098 - Retroviral aspartyl protease (RVP) // Zinc knuckle (zf-CCHC) 15 5264 Brassicales-Malvales
Gorai.010G125800.1 G. raimondii v2.1 123839047 PF00077//PF00098 - Retroviral aspartyl protease (RVP) // Zinc knuckle (zf-CCHC) 15 5264 Brassicales-Malvales
Gorai.003G148300.1 G. raimondii v2.1 123839047 PF00077//PF00098 - Retroviral aspartyl protease (RVP) // Zinc knuckle (zf-CCHC) 15 5264 Brassicales-Malvales
Gorai.013G130000.1 G. raimondii v2.1 123839047 PF00077//PF00098 - Retroviral aspartyl protease (RVP) // Zinc knuckle (zf-CCHC) 15 5264 Brassicales-Malvales
Gorai.011G206800.1 G. raimondii v2.1 123839047 PF00077//PF00098 - Retroviral aspartyl protease (RVP) // Zinc knuckle (zf-CCHC) 15 5264 Brassicales-Malvales
Gorai.010G157800.1 G. raimondii v2.1 123839047 PF00077//PF00098 - Retroviral aspartyl protease (RVP) // Zinc knuckle (zf-CCHC) 15 5264 Brassicales-Malvales
Gorai.011G123900.1 G. raimondii v2.1 123839047 PF00077//PF00098 - Retroviral aspartyl protease (RVP) // Zinc knuckle (zf-CCHC) 15 5264 Brassicales-Malvales
Gorai.004G224200.1 G. raimondii v2.1 123839047 PF00077//PF00098 - Retroviral aspartyl protease (RVP) // Zinc knuckle (zf-CCHC) 15 5264 Brassicales-Malvales
Gorai.001G115800.1 G. raimondii v2.1 123839047 PF00077//PF00098 - Retroviral aspartyl protease (RVP) // Zinc knuckle (zf-CCHC) 15 5264 Brassicales-Malvales
Brara.F01990.1.p B. rapa FPsc v1.3 123839047 PF00077//PF00098 - Retroviral aspartyl protease (RVP) // Zinc knuckle (zf-CCHC) 2 5264 Brassicales-Malvales