Gene : Gorai.003G148400 G. raimondii v2.1
Defline:  (1 of 2) PF00077//PF00098 - Retroviral aspartyl protease (RVP) // Zinc knuckle (zf-CCHC) Genomic Order:  1484
Name:  ? Gorai.003G148400 Secondary Identifier:  ? PAC:26800106
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.003G148400 0.5kb upstream 0.5kb upstream 3814 true Chr03: 41588534-41592347 Gossypium raimondii
Gorai.003G148400 0.5kb upstream 0.5kb upstream 500 false Chr03: 41591848-41592347 Gossypium raimondii
Gorai.003G148400 0.5kb downstream 0.5kb downstream 3814 true Chr03: 41588034-41591847 Gossypium raimondii
Gorai.003G148400 0.5kb downstream 0.5kb downstream 500 false Chr03: 41588034-41588533 Gossypium raimondii
Gorai.003G148400 1.0kb upstream 1.0kb upstream 4314 true Chr03: 41588534-41592847 Gossypium raimondii
Gorai.003G148400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 41591848-41592847 Gossypium raimondii
Gorai.003G148400 1.0kb downstream 1.0kb downstream 4314 true Chr03: 41587534-41591847 Gossypium raimondii
Gorai.003G148400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 41587534-41588533 Gossypium raimondii
Gorai.003G148400 2.0kb upstream 2.0kb upstream 5314 true Chr03: 41588534-41593847 Gossypium raimondii
Gorai.003G148400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 41591848-41593847 Gossypium raimondii
Gorai.003G148400 2.0kb downstream 2.0kb downstream 5314 true Chr03: 41586534-41591847 Gossypium raimondii
Gorai.003G148400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 41586534-41588533 Gossypium raimondii
Gorai.003G148400 5.0kb upstream 5.0kb upstream 8314 true Chr03: 41588534-41596847 Gossypium raimondii
Gorai.003G148400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 41591848-41596847 Gossypium raimondii
Gorai.003G148400 5.0kb downstream 5.0kb downstream 8314 true Chr03: 41583534-41591847 Gossypium raimondii
Gorai.003G148400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 41583534-41588533 Gossypium raimondii
Gorai.003G148400 10.0kb upstream 10.0kb upstream 13314 true Chr03: 41588534-41601847 Gossypium raimondii
Gorai.003G148400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 41591848-41601847 Gossypium raimondii
Gorai.003G148400 10.0kb downstream 10.0kb downstream 13314 true Chr03: 41578534-41591847 Gossypium raimondii
Gorai.003G148400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 41578534-41588533 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028362 5273 Angiosperm View MSA
123839047 5264 Brassicales-Malvales View MSA
124322542 5266 SBM View MSA
124251734 5268 Malvidae View MSA
124040401 5270 Rosid View MSA
123751157 5271 Pentapetalae View MSA
122773930 5272 Eudicot View MSA
121297863 5274 Embryophyte View MSA
123335877 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain