Gene : Gorai.004G007900 G. raimondii v2.1
Defline:  (1 of 3) PTHR12616 - VACUOLAR PROTEIN SORTING VPS41 Genomic Order:  79
Name:  ? Gorai.004G007900 Secondary Identifier:  ? PAC:26777392
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.004G007900 0.5kb upstream 0.5kb upstream 8389 true Chr04: 527140-535528 Gossypium raimondii
Gorai.004G007900 0.5kb upstream 0.5kb upstream 500 false Chr04: 527140-527639 Gossypium raimondii
Gorai.004G007900 0.5kb downstream 0.5kb downstream 8389 true Chr04: 527640-536028 Gossypium raimondii
Gorai.004G007900 0.5kb downstream 0.5kb downstream 500 false Chr04: 535529-536028 Gossypium raimondii
Gorai.004G007900 1.0kb upstream 1.0kb upstream 8889 true Chr04: 526640-535528 Gossypium raimondii
Gorai.004G007900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 526640-527639 Gossypium raimondii
Gorai.004G007900 1.0kb downstream 1.0kb downstream 8889 true Chr04: 527640-536528 Gossypium raimondii
Gorai.004G007900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 535529-536528 Gossypium raimondii
Gorai.004G007900 2.0kb upstream 2.0kb upstream 9889 true Chr04: 525640-535528 Gossypium raimondii
Gorai.004G007900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 525640-527639 Gossypium raimondii
Gorai.004G007900 2.0kb downstream 2.0kb downstream 9889 true Chr04: 527640-537528 Gossypium raimondii
Gorai.004G007900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 535529-537528 Gossypium raimondii
Gorai.004G007900 5.0kb upstream 5.0kb upstream 12889 true Chr04: 522640-535528 Gossypium raimondii
Gorai.004G007900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 522640-527639 Gossypium raimondii
Gorai.004G007900 5.0kb downstream 5.0kb downstream 12889 true Chr04: 527640-540528 Gossypium raimondii
Gorai.004G007900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 535529-540528 Gossypium raimondii
Gorai.004G007900 10.0kb upstream 10.0kb upstream 17889 true Chr04: 517640-535528 Gossypium raimondii
Gorai.004G007900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 517640-527639 Gossypium raimondii
Gorai.004G007900 10.0kb downstream 10.0kb downstream 17889 true Chr04: 527640-545528 Gossypium raimondii
Gorai.004G007900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 535529-545528 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828754 5264 Brassicales-Malvales View MSA
124343707 5266 SBM View MSA
124242429 5268 Malvidae View MSA
124066764 5270 Rosid View MSA
123748111 5271 Pentapetalae View MSA
122793294 5272 Eudicot View MSA
122046390 5273 Angiosperm View MSA
121347260 5274 Embryophyte View MSA
123424469 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain