Gene : Gorai.004G025700 G. raimondii v2.1
Defline:  (1 of 1) PTHR11946:SF5 - VALYL-TRNA SYNTHETASE, ISOFORM A Genomic Order:  257
Name:  ? Gorai.004G025700 Secondary Identifier:  ? PAC:26774737
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii TRNA-CHARGING-PWY Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.004G025700 0.5kb upstream 0.5kb upstream 8192 true Chr04: 2024517-2032708 Gossypium raimondii
Gorai.004G025700 0.5kb upstream 0.5kb upstream 500 false Chr04: 2032209-2032708 Gossypium raimondii
Gorai.004G025700 0.5kb downstream 0.5kb downstream 8192 true Chr04: 2024017-2032208 Gossypium raimondii
Gorai.004G025700 0.5kb downstream 0.5kb downstream 500 false Chr04: 2024017-2024516 Gossypium raimondii
Gorai.004G025700 1.0kb upstream 1.0kb upstream 8692 true Chr04: 2024517-2033208 Gossypium raimondii
Gorai.004G025700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 2032209-2033208 Gossypium raimondii
Gorai.004G025700 1.0kb downstream 1.0kb downstream 8692 true Chr04: 2023517-2032208 Gossypium raimondii
Gorai.004G025700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 2023517-2024516 Gossypium raimondii
Gorai.004G025700 2.0kb upstream 2.0kb upstream 9692 true Chr04: 2024517-2034208 Gossypium raimondii
Gorai.004G025700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 2032209-2034208 Gossypium raimondii
Gorai.004G025700 2.0kb downstream 2.0kb downstream 9692 true Chr04: 2022517-2032208 Gossypium raimondii
Gorai.004G025700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 2022517-2024516 Gossypium raimondii
Gorai.004G025700 5.0kb upstream 5.0kb upstream 12692 true Chr04: 2024517-2037208 Gossypium raimondii
Gorai.004G025700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 2032209-2037208 Gossypium raimondii
Gorai.004G025700 5.0kb downstream 5.0kb downstream 12692 true Chr04: 2019517-2032208 Gossypium raimondii
Gorai.004G025700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 2019517-2024516 Gossypium raimondii
Gorai.004G025700 10.0kb upstream 10.0kb upstream 17692 true Chr04: 2024517-2042208 Gossypium raimondii
Gorai.004G025700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 2032209-2042208 Gossypium raimondii
Gorai.004G025700 10.0kb downstream 10.0kb downstream 17692 true Chr04: 2014517-2032208 Gossypium raimondii
Gorai.004G025700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 2014517-2024516 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827608 5264 Brassicales-Malvales View MSA
124350639 5266 SBM View MSA
124237752 5268 Malvidae View MSA
124066992 5270 Rosid View MSA
123752070 5271 Pentapetalae View MSA
122788218 5272 Eudicot View MSA
122045228 5273 Angiosperm View MSA
121348805 5274 Embryophyte View MSA
123424302 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain