Gene : Gorai.004G038800 G. raimondii v2.1
Defline:  (1 of 2) 6.1.1.14 - Glycine--tRNA ligase / Glycyl-tRNA synthetase Genomic Order:  388
Name:  ? Gorai.004G038800 Secondary Identifier:  ? PAC:26772111
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii TRNA-CHARGING-PWY Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.004G038800 0.5kb upstream 0.5kb upstream 14700 true Chr04: 3243489-3258188 Gossypium raimondii
Gorai.004G038800 0.5kb upstream 0.5kb upstream 500 false Chr04: 3257689-3258188 Gossypium raimondii
Gorai.004G038800 0.5kb downstream 0.5kb downstream 14700 true Chr04: 3242989-3257688 Gossypium raimondii
Gorai.004G038800 0.5kb downstream 0.5kb downstream 500 false Chr04: 3242989-3243488 Gossypium raimondii
Gorai.004G038800 1.0kb upstream 1.0kb upstream 15200 true Chr04: 3243489-3258688 Gossypium raimondii
Gorai.004G038800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 3257689-3258688 Gossypium raimondii
Gorai.004G038800 1.0kb downstream 1.0kb downstream 15200 true Chr04: 3242489-3257688 Gossypium raimondii
Gorai.004G038800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 3242489-3243488 Gossypium raimondii
Gorai.004G038800 2.0kb upstream 2.0kb upstream 16200 true Chr04: 3243489-3259688 Gossypium raimondii
Gorai.004G038800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 3257689-3259688 Gossypium raimondii
Gorai.004G038800 2.0kb downstream 2.0kb downstream 16200 true Chr04: 3241489-3257688 Gossypium raimondii
Gorai.004G038800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 3241489-3243488 Gossypium raimondii
Gorai.004G038800 5.0kb upstream 5.0kb upstream 19200 true Chr04: 3243489-3262688 Gossypium raimondii
Gorai.004G038800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 3257689-3262688 Gossypium raimondii
Gorai.004G038800 5.0kb downstream 5.0kb downstream 19200 true Chr04: 3238489-3257688 Gossypium raimondii
Gorai.004G038800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 3238489-3243488 Gossypium raimondii
Gorai.004G038800 10.0kb upstream 10.0kb upstream 24200 true Chr04: 3243489-3267688 Gossypium raimondii
Gorai.004G038800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 3257689-3267688 Gossypium raimondii
Gorai.004G038800 10.0kb downstream 10.0kb downstream 24200 true Chr04: 3233489-3257688 Gossypium raimondii
Gorai.004G038800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 3233489-3243488 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827423 5264 Brassicales-Malvales View MSA
124321462 5266 SBM View MSA
124246630 5268 Malvidae View MSA
124065651 5270 Rosid View MSA
123740680 5271 Pentapetalae View MSA
122789566 5272 Eudicot View MSA
122042333 5273 Angiosperm View MSA
121346597 5274 Embryophyte View MSA
123423909 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain