Gene : Gorai.004G047000 G. raimondii v2.1
Defline:  (1 of 6) PTHR22763:SF78 - E3 UBIQUITIN-PROTEIN LIGASE RHA2A Genomic Order:  470
Name:  ? Gorai.004G047000 Secondary Identifier:  ? PAC:26775297
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-7511 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.004G047000 0.5kb upstream 0.5kb upstream 1199 true Chr04: 4177392-4178590 Gossypium raimondii
Gorai.004G047000 0.5kb upstream 0.5kb upstream 500 false Chr04: 4178091-4178590 Gossypium raimondii
Gorai.004G047000 0.5kb downstream 0.5kb downstream 1199 true Chr04: 4176892-4178090 Gossypium raimondii
Gorai.004G047000 0.5kb downstream 0.5kb downstream 500 false Chr04: 4176892-4177391 Gossypium raimondii
Gorai.004G047000 1.0kb upstream 1.0kb upstream 1699 true Chr04: 4177392-4179090 Gossypium raimondii
Gorai.004G047000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 4178091-4179090 Gossypium raimondii
Gorai.004G047000 1.0kb downstream 1.0kb downstream 1699 true Chr04: 4176392-4178090 Gossypium raimondii
Gorai.004G047000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 4176392-4177391 Gossypium raimondii
Gorai.004G047000 2.0kb upstream 2.0kb upstream 2699 true Chr04: 4177392-4180090 Gossypium raimondii
Gorai.004G047000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 4178091-4180090 Gossypium raimondii
Gorai.004G047000 2.0kb downstream 2.0kb downstream 2699 true Chr04: 4175392-4178090 Gossypium raimondii
Gorai.004G047000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 4175392-4177391 Gossypium raimondii
Gorai.004G047000 5.0kb upstream 5.0kb upstream 5699 true Chr04: 4177392-4183090 Gossypium raimondii
Gorai.004G047000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 4178091-4183090 Gossypium raimondii
Gorai.004G047000 5.0kb downstream 5.0kb downstream 5699 true Chr04: 4172392-4178090 Gossypium raimondii
Gorai.004G047000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 4172392-4177391 Gossypium raimondii
Gorai.004G047000 10.0kb upstream 10.0kb upstream 10699 true Chr04: 4177392-4188090 Gossypium raimondii
Gorai.004G047000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 4178091-4188090 Gossypium raimondii
Gorai.004G047000 10.0kb downstream 10.0kb downstream 10699 true Chr04: 4167392-4178090 Gossypium raimondii
Gorai.004G047000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 4167392-4177391 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123814862 5264 Brassicales-Malvales View MSA
124311330 5266 SBM View MSA
124254220 5268 Malvidae View MSA
124074172 5270 Rosid View MSA
123753748 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain