Gene : Gorai.004G062200 G. raimondii v2.1
Defline:  (1 of 3) PTHR33149:SF4 - PHOTOSYSTEM Q(B) PROTEIN Genomic Order:  622
Name:  ? Gorai.004G062200 Secondary Identifier:  ? PAC:26775501
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PHOTOALL-PWY Gossypium raimondii pathologic  
Graimondii PWY-101 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.004G062200 0.5kb upstream 0.5kb upstream 1000 true Chr04: 6177135-6178134 Gossypium raimondii
Gorai.004G062200 0.5kb upstream 0.5kb upstream 500 false Chr04: 6177135-6177634 Gossypium raimondii
Gorai.004G062200 0.5kb downstream 0.5kb downstream 1000 true Chr04: 6177635-6178634 Gossypium raimondii
Gorai.004G062200 0.5kb downstream 0.5kb downstream 500 false Chr04: 6178135-6178634 Gossypium raimondii
Gorai.004G062200 1.0kb upstream 1.0kb upstream 1500 true Chr04: 6176635-6178134 Gossypium raimondii
Gorai.004G062200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 6176635-6177634 Gossypium raimondii
Gorai.004G062200 1.0kb downstream 1.0kb downstream 1500 true Chr04: 6177635-6179134 Gossypium raimondii
Gorai.004G062200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 6178135-6179134 Gossypium raimondii
Gorai.004G062200 2.0kb upstream 2.0kb upstream 2500 true Chr04: 6175635-6178134 Gossypium raimondii
Gorai.004G062200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 6175635-6177634 Gossypium raimondii
Gorai.004G062200 2.0kb downstream 2.0kb downstream 2500 true Chr04: 6177635-6180134 Gossypium raimondii
Gorai.004G062200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 6178135-6180134 Gossypium raimondii
Gorai.004G062200 5.0kb upstream 5.0kb upstream 5500 true Chr04: 6172635-6178134 Gossypium raimondii
Gorai.004G062200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 6172635-6177634 Gossypium raimondii
Gorai.004G062200 5.0kb downstream 5.0kb downstream 5500 true Chr04: 6177635-6183134 Gossypium raimondii
Gorai.004G062200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 6178135-6183134 Gossypium raimondii
Gorai.004G062200 10.0kb upstream 10.0kb upstream 10500 true Chr04: 6167635-6178134 Gossypium raimondii
Gorai.004G062200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 6167635-6177634 Gossypium raimondii
Gorai.004G062200 10.0kb downstream 10.0kb downstream 10500 true Chr04: 6177635-6188134 Gossypium raimondii
Gorai.004G062200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 6178135-6188134 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839089 5264 Brassicales-Malvales View MSA
124322551 5266 SBM View MSA
124254478 5268 Malvidae View MSA
124040377 5270 Rosid View MSA
123751275 5271 Pentapetalae View MSA
122797414 5272 Eudicot View MSA
122047558 5273 Angiosperm View MSA
121350331 5274 Embryophyte View MSA
123381681 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain