Gene : Gorai.004G115100 G. raimondii v2.1
Defline:  (1 of 5) 2.5.1.16 - Spermidine synthase / Putrescine aminopropyltransferase Genomic Order:  1151
Name:  ? Gorai.004G115100 Secondary Identifier:  ? PAC:26772476
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii BSUBPOLYAMSYN-PWY Gossypium raimondii pathologic  
Graimondii POLYAMINSYN3-PWY Gossypium raimondii pathologic  
Graimondii PWY-7528 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.004G115100 0.5kb upstream 0.5kb upstream 5765 true Chr04: 27472657-27478421 Gossypium raimondii
Gorai.004G115100 0.5kb upstream 0.5kb upstream 500 false Chr04: 27472657-27473156 Gossypium raimondii
Gorai.004G115100 0.5kb downstream 0.5kb downstream 5765 true Chr04: 27473157-27478921 Gossypium raimondii
Gorai.004G115100 0.5kb downstream 0.5kb downstream 500 false Chr04: 27478422-27478921 Gossypium raimondii
Gorai.004G115100 1.0kb upstream 1.0kb upstream 6265 true Chr04: 27472157-27478421 Gossypium raimondii
Gorai.004G115100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 27472157-27473156 Gossypium raimondii
Gorai.004G115100 1.0kb downstream 1.0kb downstream 6265 true Chr04: 27473157-27479421 Gossypium raimondii
Gorai.004G115100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 27478422-27479421 Gossypium raimondii
Gorai.004G115100 2.0kb upstream 2.0kb upstream 7265 true Chr04: 27471157-27478421 Gossypium raimondii
Gorai.004G115100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 27471157-27473156 Gossypium raimondii
Gorai.004G115100 2.0kb downstream 2.0kb downstream 7265 true Chr04: 27473157-27480421 Gossypium raimondii
Gorai.004G115100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 27478422-27480421 Gossypium raimondii
Gorai.004G115100 5.0kb upstream 5.0kb upstream 10265 true Chr04: 27468157-27478421 Gossypium raimondii
Gorai.004G115100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 27468157-27473156 Gossypium raimondii
Gorai.004G115100 5.0kb downstream 5.0kb downstream 10265 true Chr04: 27473157-27483421 Gossypium raimondii
Gorai.004G115100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 27478422-27483421 Gossypium raimondii
Gorai.004G115100 10.0kb upstream 10.0kb upstream 15265 true Chr04: 27463157-27478421 Gossypium raimondii
Gorai.004G115100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 27463157-27473156 Gossypium raimondii
Gorai.004G115100 10.0kb downstream 10.0kb downstream 15265 true Chr04: 27473157-27488421 Gossypium raimondii
Gorai.004G115100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 27478422-27488421 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121579894 5273 Angiosperm View MSA
123806086 5264 Brassicales-Malvales Singleton cluster - no MSA
124303017 5266 SBM Singleton cluster - no MSA
124256778 5268 Malvidae View MSA
123953714 5270 Rosid View MSA
123530961 5271 Pentapetalae View MSA
122565896 5272 Eudicot View MSA
120852338 5274 Embryophyte View MSA
122893473 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain