Gene : Gorai.004G134000 G. raimondii v2.1
Defline:  (1 of 2) PTHR31339:SF3 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN Genomic Order:  1340
Name:  ? Gorai.004G134000 Secondary Identifier:  ? PAC:26772757
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.004G134000 0.5kb upstream 0.5kb upstream 5480 true Chr04: 36758298-36763777 Gossypium raimondii
Gorai.004G134000 0.5kb upstream 0.5kb upstream 500 false Chr04: 36758298-36758797 Gossypium raimondii
Gorai.004G134000 0.5kb downstream 0.5kb downstream 5480 true Chr04: 36758798-36764277 Gossypium raimondii
Gorai.004G134000 0.5kb downstream 0.5kb downstream 500 false Chr04: 36763778-36764277 Gossypium raimondii
Gorai.004G134000 1.0kb upstream 1.0kb upstream 5980 true Chr04: 36757798-36763777 Gossypium raimondii
Gorai.004G134000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 36757798-36758797 Gossypium raimondii
Gorai.004G134000 1.0kb downstream 1.0kb downstream 5980 true Chr04: 36758798-36764777 Gossypium raimondii
Gorai.004G134000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 36763778-36764777 Gossypium raimondii
Gorai.004G134000 2.0kb upstream 2.0kb upstream 6980 true Chr04: 36756798-36763777 Gossypium raimondii
Gorai.004G134000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 36756798-36758797 Gossypium raimondii
Gorai.004G134000 2.0kb downstream 2.0kb downstream 6980 true Chr04: 36758798-36765777 Gossypium raimondii
Gorai.004G134000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 36763778-36765777 Gossypium raimondii
Gorai.004G134000 5.0kb upstream 5.0kb upstream 9980 true Chr04: 36753798-36763777 Gossypium raimondii
Gorai.004G134000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 36753798-36758797 Gossypium raimondii
Gorai.004G134000 5.0kb downstream 5.0kb downstream 9980 true Chr04: 36758798-36768777 Gossypium raimondii
Gorai.004G134000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 36763778-36768777 Gossypium raimondii
Gorai.004G134000 10.0kb upstream 10.0kb upstream 14980 true Chr04: 36748798-36763777 Gossypium raimondii
Gorai.004G134000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 36748798-36758797 Gossypium raimondii
Gorai.004G134000 10.0kb downstream 10.0kb downstream 14980 true Chr04: 36758798-36773777 Gossypium raimondii
Gorai.004G134000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 36763778-36773777 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123806136 5264 Brassicales-Malvales Singleton cluster - no MSA
124303065 5266 SBM Singleton cluster - no MSA
124153794 5268 Malvidae Singleton cluster - no MSA
123878868 5270 Rosid Singleton cluster - no MSA
123750748 5271 Pentapetalae View MSA
122786730 5272 Eudicot View MSA
122043550 5273 Angiosperm View MSA
121310146 5274 Embryophyte View MSA
123347715 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain