Protein Family : Pectin lyase-like superfamily protein 123347715

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  106

106 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30190.t000059 (1 of 1) PTHR31339:SF3 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN R. communis v0.1 3982   30190: 3557534-3561515
Cucsa.303830 (1 of 1) PTHR31339:SF3 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN C. sativus v1.0 3411   scaffold02951: 1629441-1632851
orange1.1g013402m.g (1 of 1) PTHR31339:SF3 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN C. sinensis v1.1 5599   scaffold00009: 1443366-1448964
AT4G23820 (1 of 2) PTHR31339:SF3 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN A. thaliana TAIR10 3054   Chr4: 12397038-12400091
Thhalv10025189m.g (1 of 2) PTHR31339:SF3 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN E. salsugineum v1.0 3177   scaffold_1: 6921112-6924288
Ciclev10020162m.g (1 of 1) PTHR31339:SF3 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN C. clementina v1.0 5544   scaffold_3: 1015286-1020829
Lus10003890.g (1 of 4) PTHR31339:SF3 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN L. usitatissimum v1.0 1950   scaffold254: 72065-74014
Lus10032374.g (1 of 4) PTHR31339:SF3 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN L. usitatissimum v1.0 2507   scaffold291: 980720-983226
Lus10023101.g (1 of 4) PTHR31339:SF3 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN L. usitatissimum v1.0 2530   scaffold325: 393520-396049
Gorai.004G134000 (1 of 2) PTHR31339:SF3 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN G. raimondii v2.1 4980   Chr04: 36758798-36763777
Gorai.007G026000 (1 of 2) PTHR31339:SF3 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN G. raimondii v2.1 3968   Chr07: 1802267-1806234
Thecc1EG016449 (1 of 1) PTHR31339:SF3 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN T. cacao v1.1 5074   scaffold_3: 32914228-32919301
Migut.E01247 (1 of 2) PTHR31339:SF3 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN M. guttatus v2.0 3107   scaffold_5: 15553628-15556734
Migut.A00665 (1 of 2) PTHR31339:SF3 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN M. guttatus v2.0 2762   scaffold_1: 3692336-3695097
Araha.6872s0008 (1 of 2) PTHR31339:SF3 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN A. halleri v1.1 3072   Scaffold6872: 23172-26243
Cagra.1226s0045 (1 of 2) PTHR31339:SF3 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN C. grandiflora v1.1 3389   Scaffold1226: 193444-196832
Glyma.08G303200 (1 of 4) PTHR31339:SF3 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN G. max Wm82.a2.v1 5122   Chr08: 42128716-42133837
Glyma.14G032900 (1 of 4) PTHR31339:SF3 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN G. max Wm82.a2.v1 5608   Chr14: 2393952-2399559
Glyma.18G116400 (1 of 4) PTHR31339:SF3 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN G. max Wm82.a2.v1 5279   Chr18: 14247625-14252903
Brara.A01388 (1 of 3) PTHR31339:SF3 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN B. rapa FPsc v1.3 3103   A01: 7627815-7630917
Brara.K00722 (1 of 3) PTHR31339:SF3 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN B. rapa FPsc v1.3 2799   Scaffold25053: 192953-195751
Bostr.7867s0184 (1 of 2) PTHR31339:SF3 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN B. stricta v1.2 3341   Scaffold7867: 1087670-1091010
Medtr3g449590 (1 of 3) PTHR31339:SF3 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN M. truncatula Mt4.0v1 6547   chr3: 16889169-16895715
Medtr5g090160 (1 of 3) PTHR31339:SF3 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN M. truncatula Mt4.0v1 4684   chr5: 39270733-39275416
SapurV1A.0237s0290 (1 of 1) PTHR31339:SF3 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN S. purpurea v1.0 5906   chr03: 12050140-12056045
evm_27.TU.AmTr_v1.0_scaffold00107.39 (1 of 1) PTHR31339:SF3 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN A. trichopoda v1.0 33726   AmTr_v1.0_scaffold00107: 1638633-1672358
Traes_3AL_3DBFE1212 (1 of 88) PF00295 - Glycosyl hydrolases family 28 (Glyco_hydro_28) T. aestivum v2.2 1105   ta_iwgsc_3al_v1_4424961: 145-1249
Traes_3B_8B15B578B (1 of 88) PF00295 - Glycosyl hydrolases family 28 (Glyco_hydro_28) T. aestivum v2.2 2996   ta_iwgsc_3b_v1_3310761: 2-2997
Eucgr.D01730 (1 of 2) PTHR31339:SF3 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN E. grandis v2.0 4697   Chr04: 30817412-30822108
Eucgr.E00853 (1 of 2) PTHR31339:SF3 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN E. grandis v2.0 4207   Chr05: 8972563-8976769

106 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
30190.m010823 R. communis v0.1 123347715 Pectin lyase-like superfamily protein 1 5275 Viridiplantae
Cucsa.303830.1 C. sativus v1.0 123347715 Pectin lyase-like superfamily protein 1 5275 Viridiplantae
orange1.1g013402m C. sinensis v1.1 123347715 Pectin lyase-like superfamily protein 1 5275 Viridiplantae
AT4G23820.1 A. thaliana TAIR10 123347715 Pectin lyase-like superfamily protein 1 5275 Viridiplantae
Thhalv10025189m E. salsugineum v1.0 123347715 Pectin lyase-like superfamily protein 1 5275 Viridiplantae
Ciclev10020162m C. clementina v1.0 123347715 Pectin lyase-like superfamily protein 1 5275 Viridiplantae
Lus10032374 L. usitatissimum v1.0 123347715 Pectin lyase-like superfamily protein 3 5275 Viridiplantae
Lus10003890 L. usitatissimum v1.0 123347715 Pectin lyase-like superfamily protein 3 5275 Viridiplantae
Lus10023101 L. usitatissimum v1.0 123347715 Pectin lyase-like superfamily protein 3 5275 Viridiplantae
Gorai.007G026000.1 G. raimondii v2.1 123347715 Pectin lyase-like superfamily protein 2 5275 Viridiplantae
Gorai.004G134000.1 G. raimondii v2.1 123347715 Pectin lyase-like superfamily protein 2 5275 Viridiplantae
Thecc1EG016449t1 T. cacao v1.1 123347715 Pectin lyase-like superfamily protein 1 5275 Viridiplantae
Migut.E01247.1.p M. guttatus v2.0 123347715 Pectin lyase-like superfamily protein 2 5275 Viridiplantae
Migut.A00665.1.p M. guttatus v2.0 123347715 Pectin lyase-like superfamily protein 2 5275 Viridiplantae
Araha.6872s0008.1.p A. halleri v1.1 123347715 Pectin lyase-like superfamily protein 1 5275 Viridiplantae
Cagra.1226s0045.1.p C. grandiflora v1.1 123347715 Pectin lyase-like superfamily protein 1 5275 Viridiplantae
Glyma.14G032900.1.p G. max Wm82.a2.v1 123347715 Pectin lyase-like superfamily protein 3 5275 Viridiplantae
Glyma.08G303200.1.p G. max Wm82.a2.v1 123347715 Pectin lyase-like superfamily protein 3 5275 Viridiplantae
Glyma.18G116400.1.p G. max Wm82.a2.v1 123347715 Pectin lyase-like superfamily protein 3 5275 Viridiplantae
Brara.K00722.1.p B. rapa FPsc v1.3 123347715 Pectin lyase-like superfamily protein 2 5275 Viridiplantae
Brara.A01388.1.p B. rapa FPsc v1.3 123347715 Pectin lyase-like superfamily protein 2 5275 Viridiplantae
Bostr.7867s0184.1.p B. stricta v1.2 123347715 Pectin lyase-like superfamily protein 1 5275 Viridiplantae
Medtr3g449590.1 M. truncatula Mt4.0v1 123347715 Pectin lyase-like superfamily protein 2 5275 Viridiplantae
Medtr5g090160.1 M. truncatula Mt4.0v1 123347715 Pectin lyase-like superfamily protein 2 5275 Viridiplantae
SapurV1A.0237s0290.1.p S. purpurea v1.0 123347715 Pectin lyase-like superfamily protein 1 5275 Viridiplantae
evm_27.model.AmTr_v1.0_scaffold00107.39 A. trichopoda v1.0 123347715 Pectin lyase-like superfamily protein 1 5275 Viridiplantae
Traes_3AL_3DBFE1212.1 T. aestivum v2.2 123347715 Pectin lyase-like superfamily protein 2 5275 Viridiplantae
Traes_3B_8B15B578B.1 T. aestivum v2.2 123347715 Pectin lyase-like superfamily protein 2 5275 Viridiplantae
Eucgr.D01730.1.p E. grandis v2.0 123347715 Pectin lyase-like superfamily protein 2 5275 Viridiplantae
Eucgr.E00853.1.p E. grandis v2.0 123347715 Pectin lyase-like superfamily protein 2 5275 Viridiplantae