Gene : Gorai.004G162900 G. raimondii v2.1
Defline:  (1 of 1) PTHR11735:SF12 - TRNA N6-ADENOSINE THREONYLCARBAMOYLTRANSFERASE, MITOCHONDRIAL-RELATED Genomic Order:  1629
Name:  ? Gorai.004G162900 Secondary Identifier:  ? PAC:26775162
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY0-1587 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.004G162900 0.5kb upstream 0.5kb upstream 4452 true Chr04: 45403701-45408152 Gossypium raimondii
Gorai.004G162900 0.5kb upstream 0.5kb upstream 500 false Chr04: 45407653-45408152 Gossypium raimondii
Gorai.004G162900 0.5kb downstream 0.5kb downstream 4452 true Chr04: 45403201-45407652 Gossypium raimondii
Gorai.004G162900 0.5kb downstream 0.5kb downstream 500 false Chr04: 45403201-45403700 Gossypium raimondii
Gorai.004G162900 1.0kb upstream 1.0kb upstream 4952 true Chr04: 45403701-45408652 Gossypium raimondii
Gorai.004G162900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 45407653-45408652 Gossypium raimondii
Gorai.004G162900 1.0kb downstream 1.0kb downstream 4952 true Chr04: 45402701-45407652 Gossypium raimondii
Gorai.004G162900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 45402701-45403700 Gossypium raimondii
Gorai.004G162900 2.0kb upstream 2.0kb upstream 5952 true Chr04: 45403701-45409652 Gossypium raimondii
Gorai.004G162900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 45407653-45409652 Gossypium raimondii
Gorai.004G162900 2.0kb downstream 2.0kb downstream 5952 true Chr04: 45401701-45407652 Gossypium raimondii
Gorai.004G162900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 45401701-45403700 Gossypium raimondii
Gorai.004G162900 5.0kb upstream 5.0kb upstream 8952 true Chr04: 45403701-45412652 Gossypium raimondii
Gorai.004G162900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 45407653-45412652 Gossypium raimondii
Gorai.004G162900 5.0kb downstream 5.0kb downstream 8952 true Chr04: 45398701-45407652 Gossypium raimondii
Gorai.004G162900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 45398701-45403700 Gossypium raimondii
Gorai.004G162900 10.0kb upstream 10.0kb upstream 13952 true Chr04: 45403701-45417652 Gossypium raimondii
Gorai.004G162900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 45407653-45417652 Gossypium raimondii
Gorai.004G162900 10.0kb downstream 10.0kb downstream 13952 true Chr04: 45393701-45407652 Gossypium raimondii
Gorai.004G162900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 45393701-45403700 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832586 5264 Brassicales-Malvales View MSA
124350646 5266 SBM View MSA
124246525 5268 Malvidae View MSA
124066071 5270 Rosid View MSA
123747951 5271 Pentapetalae View MSA
122791458 5272 Eudicot View MSA
122043416 5273 Angiosperm View MSA
121345797 5274 Embryophyte View MSA
123425080 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain