Gene : Gorai.004G182200 G. raimondii v2.1
Defline:  (1 of 4) PTHR35695:SF1 - GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE, CHLOROPLASTIC Genomic Order:  1822
Name:  ? Gorai.004G182200 Secondary Identifier:  ? PAC:26777551
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY0-1319 Gossypium raimondii pathologic  
Graimondii PWY4FS-7 Gossypium raimondii pathologic  
Graimondii PWY-7411 Gossypium raimondii pathologic  
Graimondii TRIGLSYN-PWY Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.004G182200 0.5kb upstream 0.5kb upstream 8161 true Chr04: 49380119-49388279 Gossypium raimondii
Gorai.004G182200 0.5kb upstream 0.5kb upstream 500 false Chr04: 49387780-49388279 Gossypium raimondii
Gorai.004G182200 0.5kb downstream 0.5kb downstream 8161 true Chr04: 49379619-49387779 Gossypium raimondii
Gorai.004G182200 0.5kb downstream 0.5kb downstream 500 false Chr04: 49379619-49380118 Gossypium raimondii
Gorai.004G182200 1.0kb upstream 1.0kb upstream 8661 true Chr04: 49380119-49388779 Gossypium raimondii
Gorai.004G182200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 49387780-49388779 Gossypium raimondii
Gorai.004G182200 1.0kb downstream 1.0kb downstream 8661 true Chr04: 49379119-49387779 Gossypium raimondii
Gorai.004G182200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 49379119-49380118 Gossypium raimondii
Gorai.004G182200 2.0kb upstream 2.0kb upstream 9661 true Chr04: 49380119-49389779 Gossypium raimondii
Gorai.004G182200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 49387780-49389779 Gossypium raimondii
Gorai.004G182200 2.0kb downstream 2.0kb downstream 9661 true Chr04: 49378119-49387779 Gossypium raimondii
Gorai.004G182200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 49378119-49380118 Gossypium raimondii
Gorai.004G182200 5.0kb upstream 5.0kb upstream 12661 true Chr04: 49380119-49392779 Gossypium raimondii
Gorai.004G182200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 49387780-49392779 Gossypium raimondii
Gorai.004G182200 5.0kb downstream 5.0kb downstream 12661 true Chr04: 49375119-49387779 Gossypium raimondii
Gorai.004G182200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 49375119-49380118 Gossypium raimondii
Gorai.004G182200 10.0kb upstream 10.0kb upstream 17661 true Chr04: 49380119-49397779 Gossypium raimondii
Gorai.004G182200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 49387780-49397779 Gossypium raimondii
Gorai.004G182200 10.0kb downstream 10.0kb downstream 17661 true Chr04: 49370119-49387779 Gossypium raimondii
Gorai.004G182200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 49370119-49380118 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840834 5264 Brassicales-Malvales View MSA
124339399 5266 SBM View MSA
124237603 5268 Malvidae View MSA
124061873 5270 Rosid View MSA
123741043 5271 Pentapetalae View MSA
122789862 5272 Eudicot View MSA
122046647 5273 Angiosperm View MSA
121346869 5274 Embryophyte View MSA
123424445 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain