Gene : Gorai.004G233900 G. raimondii v2.1
Defline:  (1 of 4) PTHR31165:SF6 - PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 Genomic Order:  2339
Name:  ? Gorai.004G233900 Secondary Identifier:  ? PAC:26772703
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.004G233900 0.5kb upstream 0.5kb upstream 6596 true Chr04: 57140990-57147585 Gossypium raimondii
Gorai.004G233900 0.5kb upstream 0.5kb upstream 500 false Chr04: 57140990-57141489 Gossypium raimondii
Gorai.004G233900 0.5kb downstream 0.5kb downstream 6596 true Chr04: 57141490-57148085 Gossypium raimondii
Gorai.004G233900 0.5kb downstream 0.5kb downstream 500 false Chr04: 57147586-57148085 Gossypium raimondii
Gorai.004G233900 1.0kb upstream 1.0kb upstream 7096 true Chr04: 57140490-57147585 Gossypium raimondii
Gorai.004G233900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 57140490-57141489 Gossypium raimondii
Gorai.004G233900 1.0kb downstream 1.0kb downstream 7096 true Chr04: 57141490-57148585 Gossypium raimondii
Gorai.004G233900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 57147586-57148585 Gossypium raimondii
Gorai.004G233900 2.0kb upstream 2.0kb upstream 8096 true Chr04: 57139490-57147585 Gossypium raimondii
Gorai.004G233900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 57139490-57141489 Gossypium raimondii
Gorai.004G233900 2.0kb downstream 2.0kb downstream 8096 true Chr04: 57141490-57149585 Gossypium raimondii
Gorai.004G233900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 57147586-57149585 Gossypium raimondii
Gorai.004G233900 5.0kb upstream 5.0kb upstream 11096 true Chr04: 57136490-57147585 Gossypium raimondii
Gorai.004G233900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 57136490-57141489 Gossypium raimondii
Gorai.004G233900 5.0kb downstream 5.0kb downstream 11096 true Chr04: 57141490-57152585 Gossypium raimondii
Gorai.004G233900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 57147586-57152585 Gossypium raimondii
Gorai.004G233900 10.0kb upstream 10.0kb upstream 16096 true Chr04: 57131490-57147585 Gossypium raimondii
Gorai.004G233900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 57131490-57141489 Gossypium raimondii
Gorai.004G233900 10.0kb downstream 10.0kb downstream 16096 true Chr04: 57141490-57157585 Gossypium raimondii
Gorai.004G233900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 57147586-57157585 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123806128 5264 Brassicales-Malvales Singleton cluster - no MSA
124303058 5266 SBM Singleton cluster - no MSA
124153787 5268 Malvidae Singleton cluster - no MSA
123878862 5270 Rosid Singleton cluster - no MSA
123462209 5271 Pentapetalae Singleton cluster - no MSA
122497552 5272 Eudicot Singleton cluster - no MSA
122049887 5273 Angiosperm View MSA
121351474 5274 Embryophyte View MSA
123382179 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain