Gene : Gorai.004G277600 G. raimondii v2.1
Defline:  (1 of 3) PTHR22603:SF24 - PROTEIN CKA-1, ISOFORM A Genomic Order:  2776
Name:  ? Gorai.004G277600 Secondary Identifier:  ? PAC:26775085
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-3385 Gossypium raimondii pathologic  
Graimondii PWY4FS-6 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.004G277600 0.5kb upstream 0.5kb upstream 5657 true Chr04: 61054656-61060312 Gossypium raimondii
Gorai.004G277600 0.5kb upstream 0.5kb upstream 500 false Chr04: 61054656-61055155 Gossypium raimondii
Gorai.004G277600 0.5kb downstream 0.5kb downstream 5657 true Chr04: 61055156-61060812 Gossypium raimondii
Gorai.004G277600 0.5kb downstream 0.5kb downstream 500 false Chr04: 61060313-61060812 Gossypium raimondii
Gorai.004G277600 1.0kb upstream 1.0kb upstream 6157 true Chr04: 61054156-61060312 Gossypium raimondii
Gorai.004G277600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 61054156-61055155 Gossypium raimondii
Gorai.004G277600 1.0kb downstream 1.0kb downstream 6157 true Chr04: 61055156-61061312 Gossypium raimondii
Gorai.004G277600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 61060313-61061312 Gossypium raimondii
Gorai.004G277600 2.0kb upstream 2.0kb upstream 7157 true Chr04: 61053156-61060312 Gossypium raimondii
Gorai.004G277600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 61053156-61055155 Gossypium raimondii
Gorai.004G277600 2.0kb downstream 2.0kb downstream 7157 true Chr04: 61055156-61062312 Gossypium raimondii
Gorai.004G277600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 61060313-61062312 Gossypium raimondii
Gorai.004G277600 5.0kb upstream 5.0kb upstream 10157 true Chr04: 61050156-61060312 Gossypium raimondii
Gorai.004G277600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 61050156-61055155 Gossypium raimondii
Gorai.004G277600 5.0kb downstream 5.0kb downstream 10157 true Chr04: 61055156-61065312 Gossypium raimondii
Gorai.004G277600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 61060313-61065312 Gossypium raimondii
Gorai.004G277600 10.0kb upstream 10.0kb upstream 15157 true Chr04: 61045156-61060312 Gossypium raimondii
Gorai.004G277600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 61045156-61055155 Gossypium raimondii
Gorai.004G277600 10.0kb downstream 10.0kb downstream 15157 true Chr04: 61055156-61070312 Gossypium raimondii
Gorai.004G277600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 61060313-61070312 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123806466 5264 Brassicales-Malvales Singleton cluster - no MSA
124303375 5266 SBM Singleton cluster - no MSA
124154060 5268 Malvidae Singleton cluster - no MSA
123879098 5270 Rosid Singleton cluster - no MSA
123462409 5271 Pentapetalae Singleton cluster - no MSA
122797485 5272 Eudicot View MSA
122047896 5273 Angiosperm View MSA
121347088 5274 Embryophyte View MSA
123426626 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain