Gene : Gorai.012G053900 G. raimondii v2.1
Defline:  (1 of 1) PTHR23076:SF54 - ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 6, CHLOROPLASTIC Genomic Order:  539
Name:  ? Gorai.012G053900 Secondary Identifier:  ? PAC:26825580
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.012G053900 0.5kb upstream 0.5kb upstream 4792 true Chr12: 7031031-7035822 Gossypium raimondii
Gorai.012G053900 0.5kb upstream 0.5kb upstream 500 false Chr12: 7031031-7031530 Gossypium raimondii
Gorai.012G053900 0.5kb downstream 0.5kb downstream 4792 true Chr12: 7031531-7036322 Gossypium raimondii
Gorai.012G053900 0.5kb downstream 0.5kb downstream 500 false Chr12: 7035823-7036322 Gossypium raimondii
Gorai.012G053900 1.0kb upstream 1.0kb upstream 5292 true Chr12: 7030531-7035822 Gossypium raimondii
Gorai.012G053900 1.0kb upstream 1.0kb upstream 1000 false Chr12: 7030531-7031530 Gossypium raimondii
Gorai.012G053900 1.0kb downstream 1.0kb downstream 5292 true Chr12: 7031531-7036822 Gossypium raimondii
Gorai.012G053900 1.0kb downstream 1.0kb downstream 1000 false Chr12: 7035823-7036822 Gossypium raimondii
Gorai.012G053900 2.0kb upstream 2.0kb upstream 6292 true Chr12: 7029531-7035822 Gossypium raimondii
Gorai.012G053900 2.0kb upstream 2.0kb upstream 2000 false Chr12: 7029531-7031530 Gossypium raimondii
Gorai.012G053900 2.0kb downstream 2.0kb downstream 6292 true Chr12: 7031531-7037822 Gossypium raimondii
Gorai.012G053900 2.0kb downstream 2.0kb downstream 2000 false Chr12: 7035823-7037822 Gossypium raimondii
Gorai.012G053900 5.0kb upstream 5.0kb upstream 9292 true Chr12: 7026531-7035822 Gossypium raimondii
Gorai.012G053900 5.0kb upstream 5.0kb upstream 5000 false Chr12: 7026531-7031530 Gossypium raimondii
Gorai.012G053900 5.0kb downstream 5.0kb downstream 9292 true Chr12: 7031531-7040822 Gossypium raimondii
Gorai.012G053900 5.0kb downstream 5.0kb downstream 5000 false Chr12: 7035823-7040822 Gossypium raimondii
Gorai.012G053900 10.0kb upstream 10.0kb upstream 14292 true Chr12: 7021531-7035822 Gossypium raimondii
Gorai.012G053900 10.0kb upstream 10.0kb upstream 10000 false Chr12: 7021531-7031530 Gossypium raimondii
Gorai.012G053900 10.0kb downstream 10.0kb downstream 14292 true Chr12: 7031531-7045822 Gossypium raimondii
Gorai.012G053900 10.0kb downstream 10.0kb downstream 10000 false Chr12: 7035823-7045822 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835527 5264 Brassicales-Malvales View MSA
124340631 5266 SBM View MSA
124244574 5268 Malvidae View MSA
124066347 5270 Rosid View MSA
123741338 5271 Pentapetalae View MSA
122790774 5272 Eudicot View MSA
122046550 5273 Angiosperm View MSA
121351325 5274 Embryophyte View MSA
123426403 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain